ENSPPYG00000016111 (Pongo abelii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPPYG00000016111 T107159_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY

RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.826 0.997
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC

GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.826 0.997
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW

WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.826 0.997
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT

AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.777 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000018027 C2H2 ZF 214 236
ENSPPYP00000018027 C2H2 ZF 242 264
ENSPPYP00000018027 C2H2 ZF 270 292
ENSPPYP00000018027 C2H2 ZF 298 320
ENSPPYP00000018027 C2H2 ZF 354 376
ENSPPYP00000018027 C2H2 ZF 382 404
ENSPPYP00000018027 C2H2 ZF 410 432
ENSPPYP00000018027 C2H2 ZF 438 460
ENSPPYP00000018027 C2H2 ZF 466 488
ENSPPYP00000018027 C2H2 ZF 494 516
ENSPPYP00000018027 C2H2 ZF 522 544
ENSPPYP00000018027 C2H2 ZF 550 572
ENSPPYP00000018027 C2H2 ZF 578 600

Links

Other C2H2 ZF family TFs
Other Pongo abelii TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.25463s0219 Boechera stricta Bostr.25463s0219 I 0.000
Cagra.3839s0004 Capsella grandiflora Cagra.3839s0004 I 0.000
Carubv10001458m.g Capsella rubella Carubv10001458m.g I 0.000
cassava42820.valid.m1 Manihot esculenta cassava42820.valid.m1 I 0.000
chr4.CM0025.230.nd Lotus japonicus chr4.CM0025.230.nd I 0.000
estExt_fgenesh1_pg.C_840061 Physcomitrella patens estExt_fgenesh1_pg.C_840061 N 0.000
Eucgr.E00850 Eucalyptus grandis Eucgr.E00850 I 0.000
fgenesh1_pg.scaffold_195000041 Physcomitrella patens fgenesh1_pg.scaffold_195000041 N 0.000
fgenesh1_pg.scaffold_236000008 Physcomitrella patens fgenesh1_pg.scaffold_236000008 N 0.000
Gorai.004G134600 Gossypium raimondii Gorai.004G134600 I 0.000
GSMUA_Achr4G15640_001 Musa acuminata GSMUA_Achr4G15640_001 I 0.000
Pavir.Ca02643 Panicum virgatum Pavir.Ca02643 I 0.000
POPTR_0001s10490 Populus trichocarpa POPTR_0001s10490 I 0.000
POPTR_0003s13840 Populus trichocarpa POPTR_0003s13840 I 0.000
SapurV1A.0237s0250 Salix purpurea SapurV1A.0237s0250 I 0.000
TCM_016426 Theobroma cacao TCM_016426 I 0.000
Thhalv10028794m.g Eutrema salsugineum Thhalv10028794m.g I 0.000
WRKY41 Arabidopsis lyrata fgenesh2_kg.6__3080__AT4G11070.1 I 0.000
WRKY41 Arabidopsis thaliana AT4G11070 I 0.000