CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000005966
(
Pelodiscus sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPSIG00000005966
T107531_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.827
0.982
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.827
0.982
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.827
0.982
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.827
0.982
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000006493
C2H2 ZF
303
328
HCCRWIDCSALYEQQEELVRHIEKVH
ENSPSIP00000006493
C2H2 ZF
337
364
FTCFWAGCPRRYKPFNARYKLLIHMRVH
ENSPSIP00000006493
C2H2 ZF
371
394
KCTFEGCKKAFSRLENLKIHLRSH
ENSPSIP00000006493
C2H2 ZF
400
424
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSPSIP00000006493
C2H2 ZF
430
454
YACQIPGCTKRYTDPSSLRKHVKAH
ENSPSIP00000006507
C2H2 ZF
503
528
HCCRWIDCSALYEQQEELVRHIEKVH
ENSPSIP00000006507
C2H2 ZF
537
564
FTCFWAGCPRRYKPFNARYKLLIHMRVH
ENSPSIP00000006507
C2H2 ZF
571
594
KCTFEGCKKAFSRLENLKIHLRSH
ENSPSIP00000006507
C2H2 ZF
600
624
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSPSIP00000006507
C2H2 ZF
630
654
YACQIPGCTKRYTDPSSLRKHVKAH
Links
Other
C2H2 ZF
family TFs
Other
Pelodiscus sinensis
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy