CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000015554
(
Pelodiscus sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPSIG00000015554
T107716_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB49
M02901_2.00
Homo sapiens
TTYYGCYTGRCVBGTCA
TGACVBGYCARGCRRAA
SELEX
Jolma et al.(2013)
ZBTB49_1
0.819
0.975
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000017547
C2H2 ZF
396
418
YTCELCGKAFKHPSNLELHKRSH
ENSPSIP00000017547
C2H2 ZF
424
446
FECNICGKHFSQAGNLQTHLRRH
ENSPSIP00000017547
C2H2 ZF
452
474
YICEICGKRFAASGDVQRHIIIH
ENSPSIP00000017547
C2H2 ZF
480
502
HLCDICGRGFSNFSNLKEHKKTH
ENSPSIP00000017547
C2H2 ZF
508
530
FTCDECGKSFNMQRKLVKHRIRH
ENSPSIP00000017547
C2H2 ZF
536
558
YSCSACGKCFAGSGDLRRHVRTH
ENSPSIP00000017547
C2H2 ZF
564
586
YTCETCNKCFTRSAVLRRHKKMH
Links
Other
C2H2 ZF
family TFs
Other
Pelodiscus sinensis
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy