CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZNF684
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000000593
T107788_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF684
M04428_2.00
Homo sapiens
NBACAGTCCACCCCTTDV
BHAAGGGGTGGACTGTVN
SELEX
Yin et al.(2017)
ZNF684_FL_HT-SELEX
0.816
0.989
ZNF684
M07574_2.00
Homo sapiens
CWCCCCTTK
MAAGGGGWG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF684.RCADE.ReprocessedData
0.816
0.989
ZNF684
M08240_2.00
Homo sapiens
ACAGTCCACCCCTT
AAGGGGTGGACTGT
ChIP-seq
Najafabadi et al.(2015b)
ZNF684
0.816
0.989
ZNF684
M08297_2.00
Homo sapiens
ACAGTCCACCCCTTB
VAAGGGGTGGACTGT
ChIP-seq
Schmitges et al.(2016)
Q5T5D7.MEME
0.816
0.989
ZNF684
M04429_2.00
Homo sapiens
DBACAGTCCACCCCTTDR
YHAAGGGGTGGACTGTVH
SELEX
Yin et al.(2017)
ZNF684_FL_Methyl-HT-SELEX
0.816
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000001024
C2H2 ZF
159
181
YECSECGKAFKKKFHFIRHEKNH
ENSPTRP00000001024
C2H2 ZF
187
209
FECNDCGKAYSRKAHLVTHQKIH
ENSPTRP00000001024
C2H2 ZF
215
237
FVCNDCGKAFMHKAQLVVHQRLH
ENSPTRP00000001024
C2H2 ZF
243
265
YECSQCGKTFTWNSSFNQHVKSH
ENSPTRP00000001024
C2H2 ZF
271
293
FECKECGKTFRYSSSLYKHSRFH
ENSPTRP00000001024
C2H2 ZF
299
321
YQCIICGKAFGNTSVLVTHQRIH
ENSPTRP00000001024
C2H2 ZF
327
349
YRCIECGKAFIKKSHLLRHQITH
ENSPTRP00000001024
C2H2 ZF
355
377
YECNRCGKAFSQKSNLIVHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy