CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNAI3
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000008460
T107889_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SNAI3
M04607_2.00
Homo sapiens
YRCACCTGYH
DRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI3_FL_HT-SELEX
0.827
1.000
SNAI3
M04608_2.00
Homo sapiens
YVCACCTGYH
DRCAGGTGBR
SELEX
Yin et al.(2017)
SNAI3_FL_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000014425
C2H2 ZF
152
174
FECFHCHKPYHTLAGLARHRQLH
ENSPTRP00000014425
C2H2 ZF
183
205
FTCKYCDKEYTSLGALKMHIRTH
ENSPTRP00000014425
C2H2 ZF
209
231
CTCKICGKAFSRPWLLQGHVRTH
ENSPTRP00000014425
C2H2 ZF
237
259
YACSHCSRAFADRSNLRAHLQTH
ENSPTRP00000014425
C2H2 ZF
265
286
YRCRRCTKTFSRMSLLARHEES
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy