CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZSCAN5A
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000011537
T108032_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZSCAN5
M04459_2.00
Homo sapiens
NHKTCCCYVCVCAAADMN
NKHTTTGBGBRGGGAMDN
SELEX
Yin et al.(2017)
ZSCAN5_eDBD_HT-SELEX
0.827
1.000
ZSCAN5
M04460_2.00
Homo sapiens
NHGTCCCYMCHCAAADHH
DDHTTTGDGKRGGGACDN
SELEX
Yin et al.(2017)
ZSCAN5_eDBD_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000019846
C2H2 ZF
355
377
FACDVCEKRFTCNSKLVIHKRSH
ENSPTRP00000019846
C2H2 ZF
383
405
FQCNLCGKRFMQLISLQFHQRTH
ENSPTRP00000019846
C2H2 ZF
411
433
YTCDVCQKQFTQKSYLKCHKRSH
ENSPTRP00000019846
C2H2 ZF
439
461
FECKDCKKVFTYRGSLKEHQRIH
ENSPTRP00000019846
C2H2 ZF
467
489
YKCSKCPRAFSRLKLLRRHQKTH
ENSPTRP00000055713
C2H2 ZF
238
260
FACDVCEKRFTCNSKLVIHKRSH
ENSPTRP00000055713
C2H2 ZF
266
288
FQCNLCGKRFMQLISLQFHQRTH
ENSPTRP00000055713
C2H2 ZF
294
316
YTCDVCQKQFTQKSYLKCHKRSH
ENSPTRP00000055713
C2H2 ZF
322
344
FECKDCKKVFTYRGSLKEHQRIH
ENSPTRP00000055713
C2H2 ZF
350
372
YKCSKCPRAFSRLKLLRRHQKTH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy