CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF12
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000018919
T108168_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF12
M04515_2.00
Homo sapiens
NVYGCKRTAACAARYAKSMCC
GGKSMTRYTTGTTAYMGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_HT-SELEX
0.827
1.000
ZNF12
M07611_2.00
Homo sapiens
BNYBYSTYNYNGCNGCNS
SNGCNGCNRNRASRVRNV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF12.RCADE.OriginalMapping
0.827
1.000
ZNF12
M04516_2.00
Homo sapiens
NVYGCWRTAACGAGYABCMCC
GGKGVTRCTCGTTAYWGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000032325
C2H2 ZF
223
245
YECSECGKSFCKKSKFIIHQRTH
ENSPTRP00000032325
C2H2 ZF
251
273
YECNQCGKSFCQKGTLTVHQRTH
ENSPTRP00000032325
C2H2 ZF
279
301
YECNECGKNFYQKLHLIQHQRTH
ENSPTRP00000032325
C2H2 ZF
307
329
YECSYCGKSFCQKTHLTQHQRTH
ENSPTRP00000032325
C2H2 ZF
335
357
YVCHDCGKTFSQKSALNDHQKIH
ENSPTRP00000032325
C2H2 ZF
363
385
YKCSECGKCFCRKSTLTTHLRTH
ENSPTRP00000032325
C2H2 ZF
391
413
YECNECGKFFSRLSYLTVHYRTH
ENSPTRP00000032325
C2H2 ZF
419
441
YECNECGKTFYLNSALMRHQRVH
ENSPTRP00000032325
C2H2 ZF
447
469
YECNECGKLFSQLSYLTIHHRTH
ENSPTRP00000032325
C2H2 ZF
475
497
YECSECGKTFYQNSALCRHRRIH
ENSPTRP00000032325
C2H2 ZF
503
525
YECYICGKFFSQMSYLTIHHRIH
ENSPTRP00000032325
C2H2 ZF
531
553
YECSECGKTFCQNSALNRHQRTH
ENSPTRP00000032325
C2H2 ZF
559
581
YECYECGKCFSQMSYLTIHHRIH
ENSPTRP00000032325
C2H2 ZF
587
609
FECNECGKAFSRMSYLTVHYRTH
ENSPTRP00000032325
C2H2 ZF
615
637
YECTECGKKFYHKSAFNSHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy