CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Vezf1
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000009819
T108956_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VEZF1
M01172_2.00
Homo sapiens
CCCCCCMYNN
NNRKGGGGGG
PBM
Lambert et al.(2019)
pTH11265
0.827
1.000
VEZF1
M08893_2.00
Homo sapiens
YYYYBCYYYYTCCYYYYYYYYH
DRRRRRRRRGGARRRRGVRRRR
Misc
Kulakovskiy et al.(2013)
VEZF1_HUMAN.H11MO.0.C
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000052564
C2H2 ZF
174
196
HACEMCGKAFRDVYHLNRHKLSH
ENSRNOP00000052564
C2H2 ZF
202
224
FECPICNQRFKRKDRMTYHVRSH
ENSRNOP00000052564
C2H2 ZF
232
255
YTCSVCGKGFSRPDHLSCHVKHVH
ENSRNOP00000052564
C2H2 ZF
261
283
FKCQTCTAAFATKDRLRTHMVRH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy