Sall1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000013907 T108984_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and beta-catenin binding activity. Predicted to be involved in several processes, including animal organ development; negative regulation of ectoderm development; and regulation of transcription, DNA-templated. Predicted to act upstream of or within several processes, including limb morphogenesis; metanephric nephron morphogenesis; and nervous system development. Predicted to be located in chromocenter; cytoplasm; and heterochromatin. Predicted to be part of NuRD complex. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in Townes-Brocks syndrome and middle lobe syndrome. Orthologous to human SALL1 (spalt like transcription factor 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000018628 C2H2 ZF 443 465
ENSRNOP00000018628 C2H2 ZF 471 493
ENSRNOP00000018628 C2H2 ZF 698 719
ENSRNOP00000018628 C2H2 ZF 725 747
ENSRNOP00000018628 C2H2 ZF 757 779
ENSRNOP00000018628 C2H2 ZF 992 1014
ENSRNOP00000018628 C2H2 ZF 1020 1042
ENSRNOP00000018628 C2H2 ZF 1125 1147
ENSRNOP00000018628 C2H2 ZF 1153 1175

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

Invalid Input OrderBy

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action