CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOC100909657
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000014552
T109000_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000066855
C2H2 ZF
6
28
YKCDKCGKGFTRSSSLLVHHSVH
ENSRNOP00000066855
C2H2 ZF
34
56
FKCDRCGKGFSQSSKLHIHQRVH
ENSRNOP00000066855
C2H2 ZF
62
84
YECEECGMSFSQRSNLHIHQRVH
ENSRNOP00000066855
C2H2 ZF
90
112
YKCGECGKGFSQSSNLHIHRCTH
ENSRNOP00000066855
C2H2 ZF
118
140
YQCYECGKGFSQSSDLRIHLRVH
ENSRNOP00000066855
C2H2 ZF
146
168
YHCGKCGKGFSQSSKLLIHQRVH
ENSRNOP00000066855
C2H2 ZF
174
196
YECSRCGKGFSQSSNLHIHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g10286
Acanthocheilonema viteae
nAv.1.0.1.g10286
I
0.000
HR96
Aedes aegypti
AAEL007202
I
0.000
ANCCAN_15412
Ancylostoma caninum
ANCCAN_15412
I
0.000
ANCDUO_17434
Ancylostoma duodenale
ANCDUO_17434
I
0.000
ACAC_0001358501
Angiostrongylus cantonensis
ACAC_0001358501
I
0.000
ACOC_0000352001
Angiostrongylus costaricensis
ACOC_0000352001
N
0.000
ACOC_0000064201
Angiostrongylus costaricensis
ACOC_0000064201
I
0.000
ASIM_0001146101
Anisakis simplex
ASIM_0001146101
I
0.000
AALB008395
Anopheles albimanus
AALB008395
I
0.000
AARA011580
Anopheles arabiensis
AARA011580
I
0.000
AATE006049
Anopheles atroparvus
AATE006049
I
0.000
ACOM033140
Anopheles coluzzii
ACOM033140
I
0.000
ACUA008166
Anopheles culicifacies
ACUA008166
I
0.000
ADAC003041
Anopheles darlingi
ADAC003041
I
0.000
ADIR005534
Anopheles dirus
ADIR005534
I
0.000
AEPI000232
Anopheles epiroticus
AEPI000232
I
0.000
AFAF019254
Anopheles farauti
AFAF019254
I
0.000
AFUN010189
Anopheles funestus
AFUN010189
I
0.000
AGAP004224
Anopheles gambiae
AGAP004224
I
0.000
AMAM022585
Anopheles maculatus
AMAM022585
I
0.000
AMEC016766
Anopheles melas
AMEC016766
I
0.000
AMEM008752
Anopheles merus
AMEM008752
I
0.000
AMIN004130
Anopheles minimus
AMIN004130
I
0.000
AQUA008824
Anopheles quadriannulatus
AQUA008824
I
0.000
ASIS011648
Anopheles sinensis
ASIS011648
I
0.000
ASTEI03690
Anopheles stephensi
ASTEI03690
I
0.000
GB52904
Apis mellifera
GB52904
I
0.000
ASU_07898
Ascaris suum
ASU_07898
I
0.000
ACEP16468
Atta cephalotes
ACEP16468
I
0.000
BGIBMGA010782
Bombyx mori
BGIBMGA010782
I
0.000
Bm3787
Brugia malayi
Bm3787
I
0.000
BXY_1432000
Bursaphelenchus xylophilus
BXY_1432000
I
0.000
BXY_1418300
Bursaphelenchus xylophilus
BXY_1418300
I
0.000
CBN06351
Caenorhabditis brenneri
CBN06351
I
0.000
CBN31767
Caenorhabditis brenneri
CBN31767
I
0.000
CBN26095
Caenorhabditis brenneri
CBN26095
I
0.000
CBG04512
Caenorhabditis briggsae
CBG04512
I
0.000
CBG07759
Caenorhabditis briggsae
CBG07759
I
0.000
nhr-48
Caenorhabditis elegans
WBGene00003638
I
0.000
daf-12
Caenorhabditis elegans
WBGene00000908
D
0.000
CJA03214
Caenorhabditis japonica
CJA03214
I
0.000
CJA11532
Caenorhabditis japonica
CJA11532
I
0.000
CRE19106
Caenorhabditis remanei
CRE19106
I
0.000
CRE07237
Caenorhabditis remanei
CRE07237
I
0.000
Cflo_03542--XP_624213.2_APIME
Camponotus floridanus
Cflo_03542--XP_624213.2_APIME
I
0.000
CLEC000589
Cimex lectularius
CLEC000589
I
0.000
CpipJ_CPIJ016038
Culex pipiens
CpipJ_CPIJ016038
I
0.000
CPIJ016038
Culex quinquefasciatus
CPIJ016038
I
0.000
KGM_05575
Danaus plexippus
KGM_05575
I
0.000
DAPPUDRAFT_303110
Daphnia pulex
DAPPUDRAFT_303110
I
0.000
YQE_04331
Dendroctonus ponderosae
YQE_04331
I
0.000
DICVIV_03942
Dictyocaulus viviparus
DICVIV_03942
I
0.000
nDi.2.2.2.g04518
Dirofilaria immitis
nDi.2.2.2.g04518
I
0.000
nDi.2.2.2.g09652
Dirofilaria immitis
nDi.2.2.2.g09652
I
0.000
DME_0000943901
Dracunculus medinensis
DME_0000943901
I
0.000
GF16320
Drosophila ananassae
FBgn0093341
I
0.000
GG11347
Drosophila erecta
FBgn0103647
I
0.000
Hr96
Drosophila grimshawi
FBgn0020174
I
0.000
Hr96
Drosophila melanogaster
FBgn0015240
D
0.000
GI22223
Drosophila mojavensis
FBgn0144951
I
0.000
GA11197
Drosophila pseudoobscura
FBgn0071252
I
0.000
GM17786
Drosophila sechellia
FBgn0172693
I
0.000
GD21158
Drosophila simulans
FBgn0192609
I
0.000
GJ24344
Drosophila virilis
FBgn0211424
I
0.000
GK14276
Drosophila willistoni
FBgn0216282
I
0.000
GE23543
Drosophila yakuba
FBgn0240719
I
0.000
EEL_0000817201
Elaeophora elaphi
EEL_0000817201
I
0.000
EVEC_0001257601
Enterobius vermicularis
EVEC_0001257601
I
0.000
HCOI01526000
Haemonchus contortus
HCOI01526000
I
0.000
HPLM_0001602501
Haemonchus placei
HPLM_0001602501
I
0.000
HHAL000201-PA
Halyomorpha halys
HHAL000201-PA
I
0.000
Hsal_04850--XP_624213.2_APIME
Harpegnathos saltator
Hsal_04850--XP_624213.2_APIME
I
0.000
HMEL016865
Heliconius melpomene
HMEL016865
I
0.000
ISCW009328
Ixodes scapularis
ISCW009328
I
0.000
LDEC005794
Leptinotarsa decemlineata
LDEC005794
I
0.000
LOAG_10538
Loa loa
LOAG_10538
I
0.000
LCUP002913
Lucilia cuprina
LCUP002913
I
0.000
MCINX005291
Melitaea cinxia
MCINX005291
I
0.000
MhA1_Contig1158.frz3.gene18
Meloidogyne hapla
MhA1_Contig1158.frz3.gene18
I
0.000
Minc18589
Meloidogyne incognita
Minc18589
I
0.000
Minc13296
Meloidogyne incognita
Minc13296
I
0.000
MDOA002084
Musca domestica
MDOA002084
I
0.000
NV10187
Nasonia vitripennis
NV10187
I
0.000
WBGene00239037
Onchocerca volvulus
WBGene00239037
I
0.000
PTRK_0001378700
Parastrongyloides trichosuri
PTRK_0001378700
I
0.000
PTRK_0000134600
Parastrongyloides trichosuri
PTRK_0000134600
N
0.000
PTRK_0001132000
Parastrongyloides trichosuri
PTRK_0001132000
I
0.000
PHUM460970
Pediculus humanus
PHUM460970
I
0.000
PPAI005921
Phlebotomus papatasi
PPAI005921
I
0.000
scaffold889-EXSNAP2012.10
Pristionchus exspectatus
scaffold889-EXSNAP2012.10
I
0.000
scaffold61-EXSNAP2012.64
Pristionchus exspectatus
scaffold61-EXSNAP2012.64
I
0.000
scaffold1545-EXSNAP2012.2
Pristionchus exspectatus
scaffold1545-EXSNAP2012.2
I
0.000
Ppa-nhr-48
Pristionchus pacificus
PPA20177
I
0.000
Ppa-nhr-8
Pristionchus pacificus
PPA17111
I
0.000
RPRC001794
Rhodnius prolixus
RPRC001794
I
0.000
L596_g9326
Steinernema carpocapsae
L596_g9326
I
0.000
L596_g8771
Steinernema carpocapsae
L596_g8771
I
0.000
L596_g25556
Steinernema carpocapsae
L596_g25556
I
0.000
L889_g10853
Steinernema feltiae
L889_g10853
I
0.000
L893_g3995
Steinernema glaseri
L893_g3995
I
0.000
L893_g16225
Steinernema glaseri
L893_g16225
I
0.000
L893_g8292
Steinernema glaseri
L893_g8292
I
0.000
L898_g1817
Steinernema monticolum
L898_g1817
I
0.000
L898_g10498
Steinernema monticolum
L898_g10498
I
0.000
L892_g26350
Steinernema scapterisci
L892_g26350
I
0.000
L892_g18386
Steinernema scapterisci
L892_g18386
I
0.000
L892_g14860
Steinernema scapterisci
L892_g14860
I
0.000
SMAR007355
Strigamia maritima
SMAR007355
I
0.000
SPAL_0001591300
Strongyloides papillosus
SPAL_0001591300
I
0.000
SPAL_0000150000
Strongyloides papillosus
SPAL_0000150000
I
0.000
SSTP_0001272200
Strongyloides stercoralis
SSTP_0001272200
I
0.000
SSTP_0001172300
Strongyloides stercoralis
SSTP_0001172300
I
0.000
SVE_0996600
Strongyloides venezuelensis
SVE_0996600
I
0.000
SVE_0958300
Strongyloides venezuelensis
SVE_0958300
I
0.000
SVUK_0001112701
Strongylus vulgaris
SVUK_0001112701
I
0.000
SMUV_0000312501
Syphacia muris
SMUV_0000312501
I
0.000
SMUV_0001002101
Syphacia muris
SMUV_0001002101
I
0.000
TELCIR_04889
Teladorsagia circumcincta
TELCIR_04889
I
0.000
TELCIR_05516
Teladorsagia circumcincta
TELCIR_05516
I
0.000
tetur34g00750
Tetranychus urticae
tetur34g00750
I
0.000
tetur17g03630
Tetranychus urticae
tetur17g03630
I
0.000
tetur30g01210
Tetranychus urticae
tetur30g01210
N
0.000
TCLT_0000386701
Thelazia callipaeda
TCLT_0000386701
I
0.000
TC010645
Tribolium castaneum
TC010645
I
0.000
WUBG_13334
Wuchereria bancrofti
WUBG_13334
I
0.000
WUBG_12640
Wuchereria bancrofti
WUBG_12640
I
0.000
L798_15710
Zootermopsis nevadensis
L798_15710
I
0.000