CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp865
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000016279
T109028_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within hematopoietic progenitor cell differentiation. Predicted to be active in nucleoplasm. Orthologous to human ZNF784 (zinc finger protein 784). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF784
M02918_2.00
Homo sapiens
GTACCTACCK
MGGTAGGTAC
SELEX
Jolma et al.(2013)
ZNF784_1
0.823
0.983
ZNF784
M04587_2.00
Homo sapiens
VNACYTACCKN
NMGGTARGTNB
SELEX
Yin et al.(2017)
ZNF784_FL_HT-SELEX
0.823
0.983
ZNF784
M08352_2.00
Homo sapiens
NACYTWCCK
MGGWARGTN
ChIP-seq
Schmitges et al.(2016)
Q8NCA9_4-6.RCADE
0.823
0.983
ZNF784
M04588_2.00
Homo sapiens
VNACYTACCNN
NNGGTARGTNB
SELEX
Yin et al.(2017)
ZNF784_FL_Methyl-HT-SELEX
0.823
0.983
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000021917
C2H2 ZF
101
123
SRCHVCGHSCPGPASLRAHYSLH
ENSRNOP00000021917
C2H2 ZF
129
151
YRCPLCPRAFKALAPLLRHQHRH
ENSRNOP00000021917
C2H2 ZF
196
218
FACRFCAKPFRRSSDMRDHERVH
ENSRNOP00000021917
C2H2 ZF
224
246
YHCGICGKGFTQSSVLSGHARIH
ENSRNOP00000021917
C2H2 ZF
252
274
FRCMLCDRTFNNSSNFRKHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy