CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Znf48
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000017837
T109054_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000023995
C2H2 ZF
84
105
VCGECGKSFRQMSDLVKHQRTH
ENSRNOP00000023995
C2H2 ZF
111
133
YKCGVCGKGFGDSSARIKHQRTH
ENSRNOP00000023995
C2H2 ZF
163
185
TICGECGKSFRQSSDLVKHQRTH
ENSRNOP00000023995
C2H2 ZF
191
213
YKCGICGKGFGDSSARIKHQRTH
ENSRNOP00000023995
C2H2 ZF
246
268
YICTDCGKRFVLSCSLLSHQRSH
ENSRNOP00000023995
C2H2 ZF
274
296
FGCDVCGKEFARGSDLVKHLRVH
ENSRNOP00000023995
C2H2 ZF
302
324
YLCPECGKGFADSSARVKHLRTH
ENSRNOP00000023995
C2H2 ZF
330
352
HACPECNRSFSLSSTLLRHRLTH
ENSRNOP00000023995
C2H2 ZF
423
445
HKCPECGKGFRRSSDLVKHHRVH
ENSRNOP00000023995
C2H2 ZF
451
473
YLCPECGKGFADSSARVKHLRTH
ENSRNOP00000023995
C2H2 ZF
515
537
HVCGFCGKEFPRSSDLVKHRRTH
ENSRNOP00000023995
C2H2 ZF
543
565
YKCAECGKGFGDSSARIKHQRGH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy