Znf7 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000050497 T109299_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF7
M07598_2.00
Homo sapiens
VWRRMADYWNYAARWGBWGRC

GYCWVCWYTTRNWRHTKYYWB
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF7.RCADE.ReprocessedData
0.791 0.929
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000061525 C2H2 ZF 240 262
ENSRNOP00000061525 C2H2 ZF 268 290
ENSRNOP00000061525 C2H2 ZF 296 318
ENSRNOP00000061525 C2H2 ZF 324 346
ENSRNOP00000061525 C2H2 ZF 352 374
ENSRNOP00000061525 C2H2 ZF 403 425
ENSRNOP00000061525 C2H2 ZF 431 453
ENSRNOP00000061525 C2H2 ZF 459 481
ENSRNOP00000061525 C2H2 ZF 487 509
ENSRNOP00000061525 C2H2 ZF 515 537
ENSRNOP00000061525 C2H2 ZF 543 565
ENSRNOP00000061525 C2H2 ZF 571 593
ENSRNOP00000061525 C2H2 ZF 624 646
ENSRNOP00000061525 C2H2 ZF 652 674

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
36228.m000014 Ricinus communis 36228.m000014 N 0.000
AMTR_s00030p00014690 Amborella trichopoda AMTR_s00030p00014690 I 0.000
Aquca_023_00109 Aquilegia coerulea Aquca_023_00109 I 0.000
cassava21487.m1 Manihot esculenta cassava21487.m1 I 0.000
Ciclev10001715m.g Citrus clementina Ciclev10001715m.g I 0.000
Cla015261 Citrullus lanatus Cla015261 I 0.000
Cucsa.079030 Cucumis sativus Cucsa.079030 I 0.000
Eucgr.F02715 Eucalyptus grandis Eucgr.F02715 I 0.000
Lus10029773.g Linum usitatissimum Lus10029773.g I 0.000
Lus10042802.g Linum usitatissimum Lus10042802.g I 0.000
orange1.1g019163m.g Citrus sinensis orange1.1g019163m.g I 0.000
PK27109.1 Cannabis sativa PK27109.1 D 0.000
SapurV1A.0066s0110 Salix purpurea SapurV1A.0066s0110 I 0.000
VIP1 Vitis vinifera VIT_18s0076g00330 I 0.000