CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp82
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000053115
T109323_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP82
M05853_2.00
Homo sapiens
CYNYHYNYARCYNYDTYN
NRAHRNRGYTRNRDRNRG
SMiLE-seq
Isakova et al.(2017)
ZFP82
0.781
0.953
ZFP82
M08356_2.00
Homo sapiens
AGAATTAGTRAAYTGGAARAY
RTYTTCCARTTYACTAATTCT
ChIP-seq
Schmitges et al.(2016)
Q8N141_6-12.RCADE
0.781
0.953
ZFP82
M08930_2.00
Homo sapiens
TTCCADTYBAYKRWDWYTYYHTTY
RAADRRARWHWYMRTVRAHTGGAA
Misc
Kulakovskiy et al.(2013)
ZFP82_HUMAN.H11MO.0.C
0.781
0.953
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000068565
C2H2 ZF
163
185
YECDACGKAFRVRQQLTFHHRIH
ENSRNOP00000068565
C2H2 ZF
191
213
YECKECGMAFRQTAHLTRHQRLH
ENSRNOP00000068565
C2H2 ZF
219
241
YECKECGQAFIYGPDLRAHQKLH
ENSRNOP00000068565
C2H2 ZF
247
269
YACKECGKAFRVRGQLTLHQRIH
ENSRNOP00000068565
C2H2 ZF
275
296
YVCKECGKAFRQYAHLTRHQKL
ENSRNOP00000068565
C2H2 ZF
331
353
YECKDCGKAFRVRQQLTLHQRIH
ENSRNOP00000068565
C2H2 ZF
359
381
YECNECGKTFSRGYHLILHHRIH
ENSRNOP00000068565
C2H2 ZF
387
409
YECKECWKAFSRYSQLISHQSIH
ENSRNOP00000068565
C2H2 ZF
415
437
YDCKECGKAFRLLSQLTQHQSIH
ENSRNOP00000068565
C2H2 ZF
443
465
YTCKECGKSFRLRQKLTLHQSIH
ENSRNOP00000068565
C2H2 ZF
471
493
FECKECRKAFRLNSSLIQHLRIH
ENSRNOP00000068565
C2H2 ZF
499
521
YECKECKKAFRQHSHLTHHLKVH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy