CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF384
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000000702
T110159_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF384
M04451_2.00
Homo sapiens
TTTTBNNNNNNNNNNNNVAAAA
TTTTBNNNNNNNNNNNNVAAAA
SELEX
Yin et al.(2017)
ZNF384_eDBD_HT-SELEX
0.827
0.995
ZNF384
M08306_2.00
Homo sapiens
CTTTTTTTT
AAAAAAAAG
ChIP-seq
Schmitges et al.(2016)
Q8TF68_1-3.RCADE
0.827
0.995
ZNF384
M08090_2.00
Homo sapiens
WTTTTTTTNHNN
NNDNAAAAAAAW
ChIP-seq
Mathelier et al.(2014)
MA1125.1
0.827
0.995
ZNF384
M08888_2.00
Homo sapiens
BVNNBTTTTTSC
GSAAAAAVNNBV
Misc
Kulakovskiy et al.(2013)
ZN384_HUMAN.H11MO.0.C
0.827
0.995
ZNF384
M10209_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CIZ_01
0.827
0.995
ZNF384
M04452_2.00
Homo sapiens
KTTTYHNNNNNNNNNNDRAAAV
BTTTYHNNNNNNNNNNDRAAAM
SELEX
Yin et al.(2017)
ZNF384_eDBD_Methyl-HT-SELEX
0.827
0.995
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000000748
C2H2 ZF
234
256
YRCRMCSLTFFSKSEMQIHSKSH
ENSSSCP00000000748
C2H2 ZF
262
284
HKCPHCSKTFANSSYLAQHIRIH
ENSSSCP00000000748
C2H2 ZF
290
312
YSCNFCEKSFRQLSHLQQHTRIH
ENSSSCP00000000748
C2H2 ZF
323
345
HKCPHCSKTFANTSYLAQHLRIH
ENSSSCP00000000748
C2H2 ZF
351
373
YNCSYCQKAFRQLSHLQQHTRIH
ENSSSCP00000000748
C2H2 ZF
379
403
YKCAHPGCEKAFTQLSNLQSHRRQH
ENSSSCP00000000748
C2H2 ZF
409
431
FKCHNCHRAYTDAASLEVHLSTH
ENSSSCP00000000748
C2H2 ZF
439
461
YTCTICSRAYTSETYLMKHMRKH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy