ZNF184 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000001164 T110163_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF184
M08285_2.00
Homo sapiens
TCYTCWCCA

TGGWGARGA
ChIP-seq
Schmitges et al.(2016)
Q99676_4-6.RCADE
0.823 0.991
ZNF184
M07571_2.00
Homo sapiens
NNNNNBNNNNNNAYKCNHCTTTCYMDB

VHKRGAAAGDNGMRTNNNNNNVNNNNN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF184.RCADE.ReprocessedData
0.823 0.991
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000001233 C2H2 ZF 207 229
ENSSSCP00000001233 C2H2 ZF 235 257
ENSSSCP00000001233 C2H2 ZF 263 285
ENSSSCP00000001233 C2H2 ZF 291 313
ENSSSCP00000001233 C2H2 ZF 319 341
ENSSSCP00000001233 C2H2 ZF 347 369
ENSSSCP00000001233 C2H2 ZF 375 397
ENSSSCP00000001233 C2H2 ZF 403 425
ENSSSCP00000001233 C2H2 ZF 431 453
ENSSSCP00000001233 C2H2 ZF 459 481
ENSSSCP00000001233 C2H2 ZF 487 509
ENSSSCP00000001233 C2H2 ZF 515 537
ENSSSCP00000001233 C2H2 ZF 543 565
ENSSSCP00000001233 C2H2 ZF 571 593
ENSSSCP00000001233 C2H2 ZF 599 621
ENSSSCP00000001233 C2H2 ZF 627 649
ENSSSCP00000001233 C2H2 ZF 655 677
ENSSSCP00000001233 C2H2 ZF 683 705
ENSSSCP00000001233 C2H2 ZF 711 733

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
chr2.CM0060.390.nc Lotus japonicus chr2.CM0060.390.nc I 0.000
Eucgr.E00857 Eucalyptus grandis Eucgr.E00857 I 0.000
Eucgr.D01731 Eucalyptus grandis Eucgr.D01731 I 0.000
Ciclev10021265m.g Citrus clementina Ciclev10021265m.g I 0.000
Carubv10020622m.g Capsella rubella Carubv10020622m.g I 0.000
Cagra.0062s0002 Capsella grandiflora Cagra.0062s0002 I 0.000
Bostr.29223s0053 Boechera stricta Bostr.29223s0053 I 0.000
Aquca_037_00132 Aquilegia coerulea Aquca_037_00132 I 0.000
mgf021167m Mimulus guttatus mgf021167m I 0.000
mgf016403m Mimulus guttatus mgf016403m I 0.000
Cucsa.303840 Cucumis sativus Cucsa.303840 I 0.000
cassava42814.valid.m1 Manihot esculenta cassava42814.valid.m1 I 0.000
evm.TU.supercontig_79.43 Carica papaya evm.TU.supercontig_79.43 I 0.000
gene32084-v1.0-hybrid Fragaria vesca gene32084-v1.0-hybrid I 0.000
Thhalv10023588m.g Eutrema salsugineum Thhalv10023588m.g I 0.000
SapurV1A.0237s0310 Salix purpurea SapurV1A.0237s0310 I 0.000
SapurV1A.0035s0570 Salix purpurea SapurV1A.0035s0570 I 0.000
orange1.1g045091m.g Citrus sinensis orange1.1g045091m.g I 0.000
MDP0000861708 Malus domestica MDP0000861708 I 0.000
MDP0000292965 Malus domestica MDP0000292965 I 0.000
Lus10003889.g Linum usitatissimum Lus10003889.g I 0.000
Lus10001898.g Linum usitatissimum Lus10001898.g I 0.000
Gorai.012G130600 Gossypium raimondii Gorai.012G130600 I 0.000
Gorai.008G253900 Gossypium raimondii Gorai.008G253900 I 0.000
Gorai.006G207800 Gossypium raimondii Gorai.006G207800 I 0.000
30190.m010825 Ricinus communis 30190.m010825 I 0.000
Pm024053 Prunus mume Pm024053 I 0.000
fgenesh2_kg.2__42__AT1G64380.1 Arabidopsis lyrata fgenesh2_kg.2__42__AT1G64380.1 I 0.000
GLYMA01G43450 Glycine max GLYMA01G43450 I 0.000
GLYMA11G02050 Glycine max GLYMA11G02050 I 0.000
GRMZM2G100982 Zea mays GRMZM2G100982 I 0.000
GRMZM5G846057 Zea mays GRMZM5G846057 I 0.000
ERF061 Arabidopsis thaliana AT1G64380 I 0.000
POPTR_0001s10540 Populus trichocarpa POPTR_0001s10540 I 0.000
PRUPE_ppa009005mg Prunus persica PRUPE_ppa009005mg I 0.000
VIT_02s0025g01360 Vitis vinifera VIT_02s0025g01360 I 0.000
VIT_19s0014g03180 Vitis vinifera VIT_19s0014g03180 I 0.000
Cla011559 Citrullus lanatus Cla011559 I 0.000
Cla011093 Citrullus lanatus Cla011093 I 0.000
POPTR_0003s13910 Populus trichocarpa POPTR_0003s13910 I 0.000
Pavir.J01332 Panicum virgatum Pavir.J01332 N 0.000
Pavir.J10163 Panicum virgatum Pavir.J10163 N 0.000
BRADI2G15847 Brachypodium distachyon BRADI2G15847 N 0.000
BGIOSGA017525 Oryza indica BGIOSGA017525 N 0.000
OS05G0572000 Oryza sativa OS05G0572000 N 0.000
GSMUA_Achr1G27990_001 Musa acuminata GSMUA_Achr1G27990_001 N 0.000
ORUFI05G28440 Oryza rufipogon ORUFI05G28440 N 0.000
ORGLA05G0229700 Oryza glaberrima ORGLA05G0229700 N 0.000
ORGLA03G0412600 Oryza glaberrima ORGLA03G0412600 N 0.000
OPUNC05G24070 Oryza punctata OPUNC05G24070 N 0.000
ONIVA05G28560 Oryza nivara ONIVA05G28560 N 0.000
Gorai.007G026200 Gossypium raimondii Gorai.007G026200 N 0.000
MLOC_53577 Hordeum vulgare MLOC_53577 N 0.000
LPERR05G22130 Leersia perrieri LPERR05G22130 N 0.000
OGLUM05G28130 Oryza glumaepatula OGLUM05G28130 N 0.000