CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF684
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000003979
T110226_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF684
M04428_2.00
Homo sapiens
NBACAGTCCACCCCTTDV
BHAAGGGGTGGACTGTVN
SELEX
Yin et al.(2017)
ZNF684_FL_HT-SELEX
0.800
0.945
ZNF684
M07574_2.00
Homo sapiens
CWCCCCTTK
MAAGGGGWG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF684.RCADE.ReprocessedData
0.800
0.945
ZNF684
M08240_2.00
Homo sapiens
ACAGTCCACCCCTT
AAGGGGTGGACTGT
ChIP-seq
Najafabadi et al.(2015b)
ZNF684
0.800
0.945
ZNF684
M08297_2.00
Homo sapiens
ACAGTCCACCCCTTB
VAAGGGGTGGACTGT
ChIP-seq
Schmitges et al.(2016)
Q5T5D7.MEME
0.800
0.945
ZNF684
M04429_2.00
Homo sapiens
DBACAGTCCACCCCTTDR
YHAAGGGGTGGACTGTVH
SELEX
Yin et al.(2017)
ZNF684_FL_Methyl-HT-SELEX
0.800
0.945
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000004300
C2H2 ZF
161
183
YECNECGKAFKKKFHFIRHEKNH
ENSSSCP00000004300
C2H2 ZF
189
211
FECSDCGKAYSRKAHLATHQKIH
ENSSSCP00000004300
C2H2 ZF
217
239
FVCNDCGKAFMHKAQLVVHQRLH
ENSSSCP00000004300
C2H2 ZF
245
267
YECGQCGKSFTWNSSFTQHVKSH
ENSSSCP00000004300
C2H2 ZF
273
295
FECKECGKTFRYSSSLYKHSRFH
ENSSSCP00000004300
C2H2 ZF
301
323
YRCIVCGKAFGNTSVLVTHQRIH
ENSSSCP00000004300
C2H2 ZF
330
351
GCIECGKAFIKKSHLLRHQITH
ENSSSCP00000004300
C2H2 ZF
357
379
YECSKCGKAFSQKSNLIVHQKIH
ENSSSCP00000027057
C2H2 ZF
166
188
YECNECGKAFKKKFHFIRHEKNH
ENSSSCP00000027057
C2H2 ZF
194
216
FECSDCGKAYSRKAHLATHQKIH
ENSSSCP00000027057
C2H2 ZF
222
244
FVCNDCGKAFMHKAQLVVHQRLH
ENSSSCP00000027057
C2H2 ZF
250
272
YECGQCGKSFTWNSSFTQHVKSH
ENSSSCP00000027057
C2H2 ZF
278
300
FECKECGKTFRYSSSLYKHSRFH
ENSSSCP00000027057
C2H2 ZF
306
328
YRCIVCGKAFGNTSVLVTHQRIH
ENSSSCP00000027057
C2H2 ZF
335
356
GCIECGKAFIKKSHLLRHQITH
ENSSSCP00000027057
C2H2 ZF
362
384
YECSKCGKAFSQKSNLIVHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy