CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSSCG00000021888
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000021888
T110459_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF135
M05851_2.00
Homo sapiens
RGCTYRACCTCARDD
HHYTGAGGTYRAGCY
SMiLE-seq
Isakova et al.(2017)
ZNF135
0.799
0.954
ZNF135
M07647_2.00
Homo sapiens
TCGACCTCC
GGAGGTCGA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF135.RCADE.ReprocessedData
0.799
0.954
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000022405
C2H2 ZF
211
233
YKCQECGKAFSHSSALIEHHRTH
ENSSSCP00000022405
C2H2 ZF
239
261
YECHECGKGFRNSSALSKHQRIH
ENSSSCP00000022405
C2H2 ZF
267
289
YKCTQCGRTFNQTAPLTQHQRTH
ENSSSCP00000022405
C2H2 ZF
295
317
YKCSECGKSFSFRSSFSQHERTH
ENSSSCP00000022405
C2H2 ZF
323
345
YTCSQCGKAFRQSIHLTQHLRIH
ENSSSCP00000022405
C2H2 ZF
351
373
YQCGECGKAFSHSSSLTKHQRIH
ENSSSCP00000022405
C2H2 ZF
379
401
YECQACGKAFTQITPLIQHQRTH
ENSSSCP00000022405
C2H2 ZF
407
429
YECSECGKAFSQSTLLTEHRRIH
ENSSSCP00000022405
C2H2 ZF
435
457
YGCNECGKTFSHSSSLSQHERTH
ENSSSCP00000022405
C2H2 ZF
463
485
YACSQCGKAFRQSTHLTQHQRIH
ENSSSCP00000022405
C2H2 ZF
491
513
YECGDCGKAFSHSSSLTKHQRIH
ENSSSCP00000022405
C2H2 ZF
519
541
YECNECGRAFSQLAPLFQHQRIH
ENSSSCP00000022405
C2H2 ZF
547
569
YECNECGRAFSQSSLLIEHQRIH
ENSSSCP00000022405
C2H2 ZF
575
597
YGCNECGKSFSHSSSLSQHERTH
ENSSSCP00000022405
C2H2 ZF
603
625
YECQDCGKSFRQSTHLTQHRRIH
ENSSSCP00000022405
C2H2 ZF
631
653
YECRDCGKAFTHSSSLTKHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy