CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSSCG00000022319
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000022319
T110472_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF784
M02918_2.00
Homo sapiens
GTACCTACCK
MGGTAGGTAC
SELEX
Jolma et al.(2013)
ZNF784_1
0.822
0.974
ZNF784
M04587_2.00
Homo sapiens
VNACYTACCKN
NMGGTARGTNB
SELEX
Yin et al.(2017)
ZNF784_FL_HT-SELEX
0.822
0.974
ZNF784
M08352_2.00
Homo sapiens
NACYTWCCK
MGGWARGTN
ChIP-seq
Schmitges et al.(2016)
Q8NCA9_4-6.RCADE
0.822
0.974
ZNF784
M04588_2.00
Homo sapiens
VNACYTACCNN
NNGGTARGTNB
SELEX
Yin et al.(2017)
ZNF784_FL_Methyl-HT-SELEX
0.822
0.974
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000019375
C2H2 ZF
75
97
SRCHVCGRSCPGPASLRAHYSLH
ENSSSCP00000019375
C2H2 ZF
103
125
YRCPLCPRAFKALAPLLRHQHRH
ENSSSCP00000019375
C2H2 ZF
170
192
FACRFCAKPFRRSSDMRDHERVH
ENSSSCP00000019375
C2H2 ZF
198
220
YHCGVCGKGFTQSSVLSGHARIH
ENSSSCP00000019375
C2H2 ZF
226
248
FRCTLCDRTFNNSSNFRKHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy