CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSSCG00000022610
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000022610
T110479_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF317
M08308_2.00
Homo sapiens
HWGTCWKCTGTY
RACAGMWGACWD
ChIP-seq
Schmitges et al.(2016)
Q96PQ6_4-7.RCADE
0.783
0.963
ZNF317
M07584_2.00
Homo sapiens
RAGAARTCWGCTGTYADTCTWAYY
RRTWAGAHTRACAGCWGAYTTCTY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF317.RCADE.OriginalMapping
0.783
0.963
ZNF317
M08242_2.00
Homo sapiens
CYATTGTTH
DAACAATRG
ChIP-seq
Najafabadi et al.(2015b)
ZNF317
0.783
0.963
ZNF317
M08890_2.00
Homo sapiens
TRARAARTCWGCTGTYWDTC
GAHWRACAGCWGAYTTYTYA
Misc
Kulakovskiy et al.(2013)
ZN317_HUMAN.H11MO.0.C
0.783
0.963
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000019665
C2H2 ZF
226
248
HECHQCQKAFTTSASLTRHRRIH
ENSSSCP00000019665
C2H2 ZF
254
276
YECSACGKAFNDPSALRSHARTH
ENSSSCP00000019665
C2H2 ZF
282
304
FDCSQCGNAFRTLSSLKIHMRVH
ENSSSCP00000019665
C2H2 ZF
310
332
YKCDECGKAYGRSCHLIAHRRTH
ENSSSCP00000019665
C2H2 ZF
338
360
YECHDCGKAFQHPSHLKEHVRNH
ENSSSCP00000019665
C2H2 ZF
366
388
YECTQCGKAFRWKSNFNLHKKNH
ENSSSCP00000019665
C2H2 ZF
394
416
YECKECGKSFGDLLSRRKHMRIH
ENSSSCP00000019665
C2H2 ZF
422
444
VECKQCGKAFRNQSILKTHMNSH
ENSSSCP00000019665
C2H2 ZF
450
472
YGCDLCGKAFSASSNLTAHRKIH
ENSSSCP00000019665
C2H2 ZF
478
500
YECATCGKVFGDYLSRRRHMSIH
ENSSSCP00000019665
C2H2 ZF
506
528
VECRQCGKAFRNQSTLKTHMRSH
ENSSSCP00000019665
C2H2 ZF
534
556
YECDHCGKAFSIGSNLNVHRRIH
ENSSSCP00000019665
C2H2 ZF
562
584
YECLACGKAFSDHSSLRSHVKTH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy