ENSSSCG00000027549 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000027549 T110564_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Osr1
M00144_2.00
Mus musculus
NVCTHCYNN

NNRGDAGBN
PBM
Badis et al.(2009)
Osr1_3033
0.827 0.986
Osr1
M01174_2.00
Mus musculus
GCTACYGT

ACRGTAGC
PBM
Lambert et al.(2019)
pTH5339
0.827 0.986
OSR1
M04477_2.00
Homo sapiens
NGCTACYGTD

HACRGTAGCN
SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX
0.827 0.986
OSR1
M04478_2.00
Homo sapiens
NGCTACYGTD

HACRGTAGCN
SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX
0.827 0.986
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN

NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.811 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000021884 C2H2 ZF 157 179
ENSSSCP00000021884 C2H2 ZF 185 207
ENSSSCP00000021884 C2H2 ZF 213 235

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

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104 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action