ENSSSCG00000029806 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000029806 T110609_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IKZF1
M08939_2.00
Homo sapiens
HYTCCCAV

BTGGGARD
Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C
0.822 0.978
IKZF1
M10301_2.00
Homo sapiens
NHBYGGGAAYRYB

VRYRTTCCCRVDN
Transfac
Matys et al.(2006)
V$IK1_01
0.822 0.978
IKZF1
M10302_2.00
Homo sapiens
BNNWTCCCRNNN

NNNYGGGAWNNV
Transfac
Matys et al.(2006)
V$IK2_01
0.822 0.978
IKZF1
M10303_2.00
Homo sapiens
KNYHGGGAAYRYY

RRYRTTCCCDRNM
Transfac
Matys et al.(2006)
V$IK3_01
0.822 0.978
IKZF1
M10304_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IK_Q5_01
0.822 0.978
IKZF1
M10305_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IK_Q5
0.822 0.978
IKZF1
M10306_2.00
Homo sapiens
YYTCCCARA

TYTGGGARR
Transfac
Matys et al.(2006)
V$LYF1_01
0.822 0.978
Ikzf1
M08969_2.00
Mus musculus
HYTCCCAV

BTGGGARD
Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C
0.822 0.967
IKZF2
M10105_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HELIOSA_01
0.804 0.913
IKZF2
M10106_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HELIOSA_02
0.804 0.913
IKZF3
M08320_2.00
Homo sapiens
TTCCCNNSB

VSNNGGGAA
ChIP-seq
Schmitges et al.(2016)
Q9UKT9_2-4.RCADE
0.791 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000019455 C2H2 ZF 77 99
ENSSSCP00000019455 C2H2 ZF 105 127
ENSSSCP00000019455 C2H2 ZF 133 155
ENSSSCP00000019455 C2H2 ZF 161 184

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT1G13880 Arabidopsis thaliana AT1G13880 N 0.000
AT2G03470 Arabidopsis thaliana AT2G03470 N 0.000
Bo7g081200 Brassica oleracea Bo7g081200 N 0.000
Bo8g065710 Brassica oleracea Bo8g065710 N 0.000
Bo8g107180 Brassica oleracea Bo8g107180 N 0.000
Bostr.0556s0170 Boechera stricta Bostr.0556s0170 N 0.000
Bostr.13671s0067 Boechera stricta Bostr.13671s0067 N 0.000
Bra016722 Brassica rapa Bra016722 N 0.000
Bra026876 Brassica rapa Bra026876 N 0.000
Bra041096 Brassica rapa Bra041096 N 0.000
Cagra.3501s0113 Capsella grandiflora Cagra.3501s0113 N 0.000
Cagra.3545s0005 Capsella grandiflora Cagra.3545s0005 N 0.000
Carubv10009267m.g Capsella rubella Carubv10009267m.g N 0.000
Carubv10019121m.g Capsella rubella Carubv10019121m.g N 0.000
Ciclev10019841m.g Citrus clementina Ciclev10019841m.g N 0.000
fgenesh2_kg.1__1502__AT1G13880.1 Arabidopsis lyrata fgenesh2_kg.1__1502__AT1G13880.1 N 0.000
fgenesh2_kg.5__246__AT2G03470.1 Arabidopsis lyrata fgenesh2_kg.5__246__AT2G03470.1 N 0.000
Lus10004658.g Linum usitatissimum Lus10004658.g N 0.000
Lus10036888.g Linum usitatissimum Lus10036888.g N 0.000
Lus10037097.g Linum usitatissimum Lus10037097.g N 0.000
Thhalv10005386m.g Eutrema salsugineum Thhalv10005386m.g N 0.000