CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000004582
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000004582
T110670_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gli2
M01024_2.00
Mus musculus
NGACCACCYN
NRGGTGGTCN
PBM
Peterson et al.(2012)
Gli2
0.827
0.991
GLI2
M02875_2.00
Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC
SELEX
Jolma et al.(2013)
GLI2_1
0.827
0.991
GLI2
M02876_2.00
Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC
SELEX
Jolma et al.(2013)
GLI2_2
0.827
0.991
GLI2
M02732_2.00
Homo sapiens
GACCACMCAN
NTGKGTGGTC
SELEX
Jolma et al.(2010)
GLI2_monomer
0.827
0.991
GLI2
M04402_2.00
Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX
0.827
0.991
GLI2
M02641_2.00
Homo sapiens
GACCACCCAHG
CDTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI2
0.827
0.991
GLI2
M10114_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q3
0.827
0.991
GLI2
M10115_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q6
0.827
0.991
GLI2
M04403_2.00
Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY
SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX
0.827
0.991
GLI3
M04416_2.00
Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX
0.807
0.930
GLI3
M02642_2.00
Homo sapiens
GACCACCCANK
MNTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI3
0.807
0.930
GLI3
M08875_2.00
Homo sapiens
VRACCACCCAV
BTGGGTGGTYB
Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B
0.807
0.930
GLI3
M10167_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_01
0.807
0.930
GLI3
M10168_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_Q5_01
0.807
0.930
GLI3
M04417_2.00
Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG
SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX
0.807
0.930
Gli1
M01023_2.00
Mus musculus
NGACCACCHN
NDGGTGGTCN
PBM
Peterson et al.(2012)
Gli1
0.779
0.852
GLI1
M02643_2.00
Homo sapiens
GACCACCCAMG
CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI1
0.779
0.852
Gli1
M08976_2.00
Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY
Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C
0.779
0.852
GLI1
M10176_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q2
0.779
0.852
GLI1
M10177_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3_01
0.779
0.852
GLI1
M10178_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3
0.779
0.852
GLI1
M10179_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI_Q6
0.779
0.852
Gli3
M01022_2.00
Mus musculus
NGACCACCCNN
NNGGGTGGTCN
PBM
Peterson et al.(2012)
Gli3
0.761
0.922
Gli3
M08023_2.00
Mus musculus
RGVCCACCCAS
STGGGTGGBCY
ChIP-seq
Chen et al.(2011)
GSE11062_Gli3
0.761
0.922
Gli3
M09512_2.00
Mus musculus
RGACCACCCASR
YSTGGGTGGTCY
Misc
Heinz et al.(2010)
Limb-GLI3_GSE11077
0.761
0.922
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000004130
C2H2 ZF
415
440
TNCHWEDCSKEYDTQEQLVHHINNEH
ENSSTOP00000004130
C2H2 ZF
448
475
FVCRWQACTREQKPFKAQYMLVVHMRRH
ENSSTOP00000004130
C2H2 ZF
481
505
HKCTFEGCSKAYSRLENLKTHLRSH
ENSSTOP00000004130
C2H2 ZF
511
536
YVCEHEGCNKAFSNASDRAKHQNRTH
ENSSTOP00000004130
C2H2 ZF
542
567
YICKIPGCTKRYTDPSSLRKHVKTVH
ENSSTOP00000020227
C2H2 ZF
226
251
TNCHWEDCSKEYDTQEQLVHHINNEH
ENSSTOP00000020227
C2H2 ZF
259
286
FVCRWQACTREQKPFKAQYMLVVHMRRH
ENSSTOP00000020227
C2H2 ZF
292
316
HKCTFEGCSKAYSRLENLKTHLRSH
ENSSTOP00000020227
C2H2 ZF
322
347
YVCEHEGCNKAFSNASDRAKHQNRTH
ENSSTOP00000020227
C2H2 ZF
353
378
YICKIPGCTKRYTDPSSLRKHVKTVH
ENSSTOP00000020358
C2H2 ZF
336
361
TNCHWEDCSKEYDTQEQLVHHINNEH
ENSSTOP00000020358
C2H2 ZF
369
396
FVCRWQACTREQKPFKAQYMLVVHMRRH
ENSSTOP00000020358
C2H2 ZF
402
426
HKCTFEGCSKAYSRLENLKTHLRSH
ENSSTOP00000020358
C2H2 ZF
432
457
YVCEHEGCNKAFSNASDRAKHQNRTH
ENSSTOP00000020358
C2H2 ZF
463
488
YICKIPGCTKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
190 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy