CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000006275
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000006275
T110688_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF45
M08304_2.00
Homo sapiens
TRTNTTCCT
AGGAANAYA
ChIP-seq
Schmitges et al.(2016)
Q02386_10-12.RCADE
0.815
0.963
ZNF45
M08241_2.00
Homo sapiens
KCTGGATTYTGTTAT
ATAACARAATCCAGM
ChIP-seq
Najafabadi et al.(2015b)
ZNF45
0.815
0.963
ZNF45
M07579_2.00
Homo sapiens
CAKCTCCAGVD
HBCTGGAGMTG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF45.ChIP-seq.ReprocessedData
0.815
0.963
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000005606
C2H2 ZF
266
288
YKCEECGVSFSHSSYLQVHQRVH
ENSSTOP00000005606
C2H2 ZF
294
316
YKCEECGKGFSWRSRLQAHQRIH
ENSSTOP00000005606
C2H2 ZF
322
344
YKCNACGKGFSYSSHLNIHCRIH
ENSSTOP00000005606
C2H2 ZF
350
372
YKCEECGKGFSVGSHLQAHQISH
ENSSTOP00000005606
C2H2 ZF
378
400
YKCEECGKGFCRASNLLDHQRGH
ENSSTOP00000005606
C2H2 ZF
406
428
YQCDACGKGFSRSSDFNIHFRVH
ENSSTOP00000005606
C2H2 ZF
434
456
YKCEECGKGFSQASNLLAHQRGH
ENSSTOP00000005606
C2H2 ZF
462
484
YKCGTCGKGFSRSSDLNVHCRIH
ENSSTOP00000005606
C2H2 ZF
490
512
YKCEKCGKAFSQFSSLQVHQRVH
ENSSTOP00000005606
C2H2 ZF
518
540
YQCAECGKGFSVGSQLQAHQRCH
ENSSTOP00000005606
C2H2 ZF
546
568
YQCAECGKGFCRASNFLAHRGVH
ENSSTOP00000005606
C2H2 ZF
574
596
YRCDVCGKRFRQRSYLQAHQRVH
ENSSTOP00000005606
C2H2 ZF
602
624
YKCEECGKVFSWSSYLQAHQRVH
ENSSTOP00000005606
C2H2 ZF
630
652
YTCEECGKGFSWSSSLIIHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy