CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000013104
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000013104
T110755_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF200
M00218_2.00
Homo sapiens
NRTMTCCNNN
NNNGGAKAYN
PBM
Barrera et al.(2016)
ZNF200_REF
0.821
0.983
ZNF200
M08273_2.00
Homo sapiens
RCTTCCGSBNBV
BVNVSCGGAAGY
ChIP-seq
Schmitges et al.(2016)
P98182_2-5.RCADE
0.821
0.983
ZNF200
M08232_2.00
Homo sapiens
AYTTCC
GGAART
ChIP-seq
Najafabadi et al.(2015b)
ZNF200
0.821
0.983
ZNF200
M00217_2.00
Homo sapiens
NNWCTCAWTWN
NWAWTGAGWNN
PBM
Barrera et al.(2016)
ZNF200_H322Y
0.777
0.974
ZNF200
M00219_2.00
Homo sapiens
NRYHTCCNNN
NNNGGADRYN
PBM
Barrera et al.(2016)
ZNF200_S265Y
0.775
0.974
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000011740
C2H2 ZF
249
271
YTCPLCGKQFNESSYLISHQRTH
ENSSTOP00000011740
C2H2 ZF
277
299
YDCSHCGKSFNHKTNLNKHERIH
ENSSTOP00000011740
C2H2 ZF
305
327
YSCSQCGKNFRQNSHRSRHEGIH
ENSSTOP00000011740
C2H2 ZF
333
355
FKCPECGKTFPKNEEFVLHLQSH
ENSSTOP00000011740
C2H2 ZF
361
383
YGCKKCGRRFGRLSNCTRHERTH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy