CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000019879
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000019879
T110808_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN5
M07709_2.00
Homo sapiens
TCACCTCCN
NGGAGGTGA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN5.RCADE.OriginalMapping
0.819
0.964
Zkscan5
M00785_2.00
Mus musculus
NWYDHBDNHN
NDNHVDHRWN
PBM
Weirauch et al.(2013)
pTH2283
0.806
0.942
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000019979
C2H2 ZF
347
369
HRCTDCGKFFLQASNFIQHRRIH
ENSSTOP00000019979
C2H2 ZF
375
397
FKCGECGKSYNQRVHLTQHQRVH
ENSSTOP00000019979
C2H2 ZF
403
425
YKCQVCGKAFRVSSHLVQHHSVH
ENSSTOP00000019979
C2H2 ZF
431
453
YGCNECGKNFGRHSHLIEHLKRH
ENSSTOP00000019979
C2H2 ZF
549
571
HKCNECGKSFIQSAHLIQHQRIH
ENSSTOP00000019979
C2H2 ZF
577
599
FRCDECGKSYNQRVHLTQHQRVH
ENSSTOP00000019979
C2H2 ZF
605
627
YTCHLCGKAFRVRSHLVQHQSVH
ENSSTOP00000019979
C2H2 ZF
633
655
FKCNECGKGFGRRSHLAGHLRLH
ENSSTOP00000019979
C2H2 ZF
661
683
HQCHECGEIFFQYVSLIEHQVLH
ENSSTOP00000019979
C2H2 ZF
717
739
YKCDICGRAFNYSSDLIQHYRTH
ENSSTOP00000019979
C2H2 ZF
773
795
HQCNECGRVFTLKSHLNQHQRIH
ENSSTOP00000019979
C2H2 ZF
801
823
FQCKECGMSFSWSCSLFKHLRSH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy