CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000021569
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000021569
T110850_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF317
M08308_2.00
Homo sapiens
HWGTCWKCTGTY
RACAGMWGACWD
ChIP-seq
Schmitges et al.(2016)
Q96PQ6_4-7.RCADE
0.797
0.963
ZNF317
M07584_2.00
Homo sapiens
RAGAARTCWGCTGTYADTCTWAYY
RRTWAGAHTRACAGCWGAYTTCTY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF317.RCADE.OriginalMapping
0.797
0.963
ZNF317
M08242_2.00
Homo sapiens
CYATTGTTH
DAACAATRG
ChIP-seq
Najafabadi et al.(2015b)
ZNF317
0.797
0.963
ZNF317
M08890_2.00
Homo sapiens
TRARAARTCWGCTGTYWDTC
GAHWRACAGCWGAYTTYTYA
Misc
Kulakovskiy et al.(2013)
ZN317_HUMAN.H11MO.0.C
0.797
0.963
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000021413
C2H2 ZF
205
227
HECQQCQKAFTTSASLTRHRRIH
ENSSTOP00000021413
C2H2 ZF
233
255
YGCSDCGKAFNDPSALRSHARTH
ENSSTOP00000021413
C2H2 ZF
261
283
FDCSQCGNAFRTLSALKIHMRVH
ENSSTOP00000021413
C2H2 ZF
289
311
YKCDECGKAYGRSCHLIAHKRTH
ENSSTOP00000021413
C2H2 ZF
317
339
YECQDCGKAFQHPSHLKEHVRNH
ENSSTOP00000021413
C2H2 ZF
345
367
YECTQCGKAFRWKSNFNLHKKNH
ENSSTOP00000021413
C2H2 ZF
373
395
YECKECGKSFGDLLSRRKHMRIH
ENSSTOP00000021413
C2H2 ZF
401
423
VECRQCGKAFRNQSILKTHMNSH
ENSSTOP00000021413
C2H2 ZF
429
451
YGCDLCGKAFSASSNLTAHRKIH
ENSSTOP00000021413
C2H2 ZF
457
479
YECAACGKIFGDYLSRRRHMSIH
ENSSTOP00000021413
C2H2 ZF
485
507
VECRQCGKAFRNQSTLKTHMRSH
ENSSTOP00000021413
C2H2 ZF
513
535
YECDHCGKAFSIGSNLNVHRRIH
ENSSTOP00000021413
C2H2 ZF
541
563
YECLACGKAFSDHSSLRSHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy