CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000024337
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000024337
T110915_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF189
M08311_2.00
Homo sapiens
VDGGAASRGMVDNDSNNN
NNNSHNHBKCYSTTCCHB
ChIP-seq
Schmitges et al.(2016)
O75820_5-10.RCADE
0.765
0.932
ZNF189
M07589_2.00
Homo sapiens
NBKCBSTTCCHB
VDGGAASVGMVN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF189.RCADE.ReprocessedData
0.765
0.932
ZNF189
M08244_2.00
Homo sapiens
TGGAAAA
TTTTCCA
ChIP-seq
Najafabadi et al.(2015b)
ZNF189
0.765
0.932
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000016171
C2H2 ZF
148
170
HKCEECGKGFVRKAHFIQHQRVH
ENSSTOP00000016171
C2H2 ZF
176
198
FQCNECGKSFSRSSFVIEHQRIH
ENSSTOP00000016171
C2H2 ZF
204
226
YECNYCGKTFSVSSTLIRHQRIH
ENSSTOP00000016171
C2H2 ZF
232
254
YQCNQCKQSFSQRRSLVKHQRIH
ENSSTOP00000016171
C2H2 ZF
260
282
HKCSDCGKAFSWKSHLIQHQRTH
ENSSTOP00000016171
C2H2 ZF
288
310
YHCTKCKKSFSRNSLLVEHQRIH
ENSSTOP00000016171
C2H2 ZF
316
338
HKCGECGKAFRLSTYLIQHQKIH
ENSSTOP00000016171
C2H2 ZF
344
366
FLCIECGKSFSRSSFLIEHQRIH
ENSSTOP00000016171
C2H2 ZF
372
394
YQCKECGKSFSQLCNLTRHQRIH
ENSSTOP00000016171
C2H2 ZF
400
422
HKCEECGKAFSRSSGLIQHQRIH
ENSSTOP00000016171
C2H2 ZF
456
478
YKCDECGKTFSVSAHLVQHQRIH
ENSSTOP00000016171
C2H2 ZF
484
506
YLCTVCGKSFSRSSFLIEHQRIH
ENSSTOP00000016171
C2H2 ZF
512
534
YLCRQCGKSFSQLCNLIRHQGVH
ENSSTOP00000016171
C2H2 ZF
540
562
HKCEECGKAFSRNSGLIQHQRIH
ENSSTOP00000016171
C2H2 ZF
568
590
YKCEKCDKSFSQQRSLVNHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy