prdm1a (Tetraodon nigroviridis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTNIG00000003926 T111952_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000003375 C2H2 ZF 394 416
ENSTNIP00000003375 C2H2 ZF 422 444
ENSTNIP00000003375 C2H2 ZF 450 472
ENSTNIP00000003375 C2H2 ZF 478 500
ENSTNIP00000003375 C2H2 ZF 506 527
ENSTNIP00000006534 C2H2 ZF 404 426
ENSTNIP00000006534 C2H2 ZF 432 454
ENSTNIP00000006534 C2H2 ZF 460 482
ENSTNIP00000006534 C2H2 ZF 488 510
ENSTNIP00000006534 C2H2 ZF 516 537

Links

Other C2H2 ZF family TFs
Other Tetraodon nigroviridis TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXMAG00000013351 Xiphophorus maculatus ENSXMAG00000013351 N 0.783
ENSPFOG00000018298 Poecilia formosa ENSPFOG00000018298 N 0.783