zbtb7a (Tetraodon nigroviridis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTNIG00000004415 T111962_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB7A
M02914_2.00
Homo sapiens
NRCGACCACCNV

BNGGTGGTCGYN
SELEX
Jolma et al.(2013)
ZBTB7A_1
0.820 0.945
ZBTB7A
M04579_2.00
Homo sapiens
DCGACCMCCVH

DBGGKGGTCGH
SELEX
Yin et al.(2017)
ZBTB7A_eDBD_HT-SELEX
0.820 0.945
ZBTB7A
M08095_2.00
Homo sapiens
NBSRCTTCCGGNN

NNCCGGAAGYSVN
ChIP-seq
Mathelier et al.(2014)
MA0750.2
0.820 0.945
ZBTB7A
M07937_2.00
Homo sapiens
SNVVGMCCCYNNSBS

SVSNNRGGGKCBBNS
ChIP-seq
Gerstein et al.(2012)
K562_ZBTB7A_HudsonAlpha
0.820 0.945
ZBTB7A
M08926_2.00
Homo sapiens
VVGMCCCYB

VRGGGKCBB
Misc
Kulakovskiy et al.(2013)
ZBT7A_HUMAN.H11MO.0.A
0.820 0.945
Zbtb7a
M08991_2.00
Mus musculus
VVGMCCCYB

VRGGGKCBB
Misc
Kulakovskiy et al.(2013)
ZBT7A_MOUSE.H11MO.0.B
0.820 0.945
ZBTB7A
M10273_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRF_Q2
0.820 0.945
ZBTB7A
M10274_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRF_Q3
0.820 0.945
ZBTB7A
M10275_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRF_Q6
0.820 0.945
ZBTB7A
M10276_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBTB7A_02
0.820 0.945
ZBTB7A
M10277_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBTB7A_03
0.820 0.945
ZBTB7A
M04580_2.00
Homo sapiens
DCGACCACCNH

DNGGTGGTCGH
SELEX
Yin et al.(2017)
ZBTB7A_eDBD_Methyl-HT-SELEX
0.820 0.945
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000007051 C2H2 ZF 334 356
ENSTNIP00000007051 C2H2 ZF 362 384
ENSTNIP00000007051 C2H2 ZF 390 412
ENSTNIP00000007051 C2H2 ZF 418 439

Links

Other C2H2 ZF family TFs
Other Tetraodon nigroviridis TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_023_00050 Aquilegia coerulea Aquca_023_00050 N 0.000
Ca_04298 Cicer arietinum Ca_04298 N 0.000
Ciclev10003213m.g Citrus clementina Ciclev10003213m.g N 0.000
orange1.1g041748m.g Citrus sinensis orange1.1g041748m.g N 0.000
Eucgr.F02630 Eucalyptus grandis Eucgr.F02630 N 0.000
gene27489-v1.0-hybrid Fragaria vesca gene27489-v1.0-hybrid N 0.000
GLYMA20G31680 Glycine max GLYMA20G31680 N 0.000
GLYMA16G27310 Glycine max GLYMA16G27310 N 0.000
GLYMA10G35920 Glycine max GLYMA10G35920 N 0.000
GLYMA02G08241 Glycine max GLYMA02G08241 N 0.000
Gorai.005G075100 Gossypium raimondii Gorai.005G075100 N 0.000
Gorai.009G289600 Gossypium raimondii Gorai.009G289600 N 0.000
Lus10014822.g Linum usitatissimum Lus10014822.g N 0.000
Lus10017908.g Linum usitatissimum Lus10017908.g N 0.000
chr5.LjT08L18.130.nd Lotus japonicus chr5.LjT08L18.130.nd N 0.000
MDP0000512470 Malus domestica MDP0000512470 N 0.000
MDP0000203826 Malus domestica MDP0000203826 N 0.000
MDP0000169115 Malus domestica MDP0000169115 N 0.000
MDP0000162468 Malus domestica MDP0000162468 N 0.000
cassava27916.m1 Manihot esculenta cassava27916.m1 N 0.000
cassava25355.m1 Manihot esculenta cassava25355.m1 N 0.000
MTR_1g096030 Medicago truncatula MTR_1g096030 N 0.000
mgf023389m Mimulus guttatus mgf023389m N 0.000
POPTR_0019s11540 Populus trichocarpa POPTR_0019s11540 N 0.000
POPTR_0013s11930 Populus trichocarpa POPTR_0013s11930 N 0.000
Pm022208 Prunus mume Pm022208 N 0.000
PRUPE_ppa017519mg Prunus persica PRUPE_ppa017519mg N 0.000
29728.m000844 Ricinus communis 29728.m000844 N 0.000
SapurV1A.2874s0010 Salix purpurea SapurV1A.2874s0010 N 0.000
TCM_036707 Theobroma cacao TCM_036707 N 0.000
VIT_18s0076g00200 Vitis vinifera VIT_18s0076g00200 N 0.000