CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zbtb7a
(
Tetraodon nigroviridis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTNIG00000004415
T111962_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB7A
M02914_2.00
Homo sapiens
NRCGACCACCNV
BNGGTGGTCGYN
SELEX
Jolma et al.(2013)
ZBTB7A_1
0.820
0.945
ZBTB7A
M04579_2.00
Homo sapiens
DCGACCMCCVH
DBGGKGGTCGH
SELEX
Yin et al.(2017)
ZBTB7A_eDBD_HT-SELEX
0.820
0.945
ZBTB7A
M08095_2.00
Homo sapiens
NBSRCTTCCGGNN
NNCCGGAAGYSVN
ChIP-seq
Mathelier et al.(2014)
MA0750.2
0.820
0.945
ZBTB7A
M07937_2.00
Homo sapiens
SNVVGMCCCYNNSBS
SVSNNRGGGKCBBNS
ChIP-seq
Gerstein et al.(2012)
K562_ZBTB7A_HudsonAlpha
0.820
0.945
ZBTB7A
M08926_2.00
Homo sapiens
VVGMCCCYB
VRGGGKCBB
Misc
Kulakovskiy et al.(2013)
ZBT7A_HUMAN.H11MO.0.A
0.820
0.945
Zbtb7a
M08991_2.00
Mus musculus
VVGMCCCYB
VRGGGKCBB
Misc
Kulakovskiy et al.(2013)
ZBT7A_MOUSE.H11MO.0.B
0.820
0.945
ZBTB7A
M10273_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRF_Q2
0.820
0.945
ZBTB7A
M10274_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRF_Q3
0.820
0.945
ZBTB7A
M10275_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRF_Q6
0.820
0.945
ZBTB7A
M10276_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBTB7A_02
0.820
0.945
ZBTB7A
M10277_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBTB7A_03
0.820
0.945
ZBTB7A
M04580_2.00
Homo sapiens
DCGACCACCNH
DNGGTGGTCGH
SELEX
Yin et al.(2017)
ZBTB7A_eDBD_Methyl-HT-SELEX
0.820
0.945
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000007051
C2H2 ZF
334
356
QKCPICSKVIQGAGKLPRHIRTH
ENSTNIP00000007051
C2H2 ZF
362
384
YECAICKVRFTRQDKLKVHMRKH
ENSTNIP00000007051
C2H2 ZF
390
412
YLCTQCGAAFAHNYDLKNHMRVH
ENSTNIP00000007051
C2H2 ZF
418
439
YQCSSCFKTFVRSDHLHRHLKK
Links
Other
C2H2 ZF
family TFs
Other
Tetraodon nigroviridis
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_023_00050
Aquilegia coerulea
Aquca_023_00050
N
0.000
Ca_04298
Cicer arietinum
Ca_04298
N
0.000
Ciclev10003213m.g
Citrus clementina
Ciclev10003213m.g
N
0.000
orange1.1g041748m.g
Citrus sinensis
orange1.1g041748m.g
N
0.000
Eucgr.F02630
Eucalyptus grandis
Eucgr.F02630
N
0.000
gene27489-v1.0-hybrid
Fragaria vesca
gene27489-v1.0-hybrid
N
0.000
GLYMA20G31680
Glycine max
GLYMA20G31680
N
0.000
GLYMA16G27310
Glycine max
GLYMA16G27310
N
0.000
GLYMA10G35920
Glycine max
GLYMA10G35920
N
0.000
GLYMA02G08241
Glycine max
GLYMA02G08241
N
0.000
Gorai.005G075100
Gossypium raimondii
Gorai.005G075100
N
0.000
Gorai.009G289600
Gossypium raimondii
Gorai.009G289600
N
0.000
Lus10014822.g
Linum usitatissimum
Lus10014822.g
N
0.000
Lus10017908.g
Linum usitatissimum
Lus10017908.g
N
0.000
chr5.LjT08L18.130.nd
Lotus japonicus
chr5.LjT08L18.130.nd
N
0.000
MDP0000512470
Malus domestica
MDP0000512470
N
0.000
MDP0000203826
Malus domestica
MDP0000203826
N
0.000
MDP0000169115
Malus domestica
MDP0000169115
N
0.000
MDP0000162468
Malus domestica
MDP0000162468
N
0.000
cassava27916.m1
Manihot esculenta
cassava27916.m1
N
0.000
cassava25355.m1
Manihot esculenta
cassava25355.m1
N
0.000
MTR_1g096030
Medicago truncatula
MTR_1g096030
N
0.000
mgf023389m
Mimulus guttatus
mgf023389m
N
0.000
POPTR_0019s11540
Populus trichocarpa
POPTR_0019s11540
N
0.000
POPTR_0013s11930
Populus trichocarpa
POPTR_0013s11930
N
0.000
Pm022208
Prunus mume
Pm022208
N
0.000
PRUPE_ppa017519mg
Prunus persica
PRUPE_ppa017519mg
N
0.000
29728.m000844
Ricinus communis
29728.m000844
N
0.000
SapurV1A.2874s0010
Salix purpurea
SapurV1A.2874s0010
N
0.000
TCM_036707
Theobroma cacao
TCM_036707
N
0.000
VIT_18s0076g00200
Vitis vinifera
VIT_18s0076g00200
N
0.000