CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
si:ch211-154o6.2
(
Tetraodon nigroviridis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTNIG00000008018
T112020_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000010840
C2H2 ZF
247
269
HKCPHCDKSFANSSYLAQHIRIH
ENSTNIP00000010840
C2H2 ZF
275
296
YTCTYCQKSFRQLSHLQQHARY
ENSTNIP00000010840
C2H2 ZF
307
329
HKCPHCTKSFANSSYLAQHIRIH
ENSTNIP00000010840
C2H2 ZF
335
356
YTCDFCHKSFRQLSHLQQHGRF
ENSTNIP00000010840
C2H2 ZF
363
386
YRCTQPCEKAFTQLSNLQSHRRQH
ENSTNIP00000010840
C2H2 ZF
392
414
YKCTFCNKGYIDSASLDVHMSTH
ENSTNIP00000010840
C2H2 ZF
422
444
YSCGLCDRTYTSETYLVKHMEKH
Links
Other
C2H2 ZF
family TFs
Other
Tetraodon nigroviridis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
si:ch211-154o6.2
Takifugu rubripes
ENSTRUG00000011097
N
0.807
si:ch211-154o6.2
Gasterosteus aculeatus
ENSGACG00000009774
N
0.791