glis2b (Tetraodon nigroviridis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTNIG00000009741 T112050_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Glis2
M00129_2.00
Mus musculus
NKACCCCYYNN

NNRRGGGGTMN
PBM
Badis et al.(2009)
Glis2_1757
0.811 0.971
GLIS2
M02887_2.00
Homo sapiens
KACCCCCCRCRDHG

CDHYGYGGGGGGTM
SELEX
Jolma et al.(2013)
GLIS2_1
0.811 0.957
GLIS2
M04449_2.00
Homo sapiens
RCCCCCCRCRWHGH

DCDWYGYGGGGGGY
SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX
0.811 0.957
GLIS2
M04450_2.00
Homo sapiens
DCWHYGYDGGGGGT

ACCCCCHRCRDWGH
SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX
0.811 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000012627 C2H2 ZF 231 253
ENSTNIP00000012627 C2H2 ZF 259 283
ENSTNIP00000012627 C2H2 ZF 289 313

Links

Other C2H2 ZF family TFs
Other Tetraodon nigroviridis TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Glis2 Mus musculus ENSMUSG00000014303 D 0.811
GLIS2 Homo sapiens ENSG00000126603 D 0.811
glis2.L Xenopus laevis XB-GENE-6252690 I 0.789
GLIS2 Pteropus vampyrus ENSPVAG00000017802 I 0.811
GLIS2 Pan troglodytes ENSPTRG00000007714 I 0.811
ENSPPYG00000007055 Pongo abelii ENSPPYG00000007055 I 0.811
GLIS2 Procavia capensis ENSPCAG00000011063 I 0.827
GLIS2 Ochotona princeps ENSOPRG00000000484 I 0.811
GLIS2 Otolemur garnettii ENSOGAG00000015200 I 0.811
GLIS2 Oryctolagus cuniculus ENSOCUG00000012971 I 0.811
Glis2 Rattus norvegicus ENSRNOG00000004766 I 0.811
ENSSHAG00000010956 Sarcophilus harrisii ENSSHAG00000010956 I 0.827
GLIS2 Sus scrofa ENSSSCG00000023653 I 0.811
Pvit_18995 Pogona vitticeps Pvit_18995 I 0.827
Myotis_brandtii_GLIS2_10028036 Myotis brandtii Myotis_brandtii_GLIS2_10028036 I 0.811
ENSBTAP00000012119-D1 Bos grunniens ENSBTAP00000012119-D1 I 0.811
Cmyd_10017688 Chelonia mydas Cmyd_10017688 I 0.811
Alligator_sinensis_CCG004454.1 Alligator sinensis Alligator_sinensis_CCG004454.1 I 0.827
SPU_010542 Strongylocentrotus purpuratus SPU_010542 I 0.769
SINV25327 Solenopsis invicta SINV25327 I 0.762
GLIS2 Tursiops truncatus ENSTTRG00000002711 I 0.811
ENSSTOG00000025049 Ictidomys tridecemlineatus ENSSTOG00000025049 I 0.811
ENSOARG00000003260 Ovis aries ENSOARG00000003260 I 0.811
GLIS2 Ornithorhynchus anatinus ENSOANG00000010385 I 0.827
ENSNLEG00000009834 Nomascus leucogenys ENSNLEG00000009834 I 0.811
ENSDORG00000014886 Dipodomys ordii ENSDORG00000014886 I 0.811
GLIS2 Dasypus novemcinctus ENSDNOG00000010899 I 0.795
ENSCSAG00000009593 Chlorocebus sabaeus ENSCSAG00000009593 I 0.811
ENSCPOG00000004787 Cavia porcellus ENSCPOG00000004787 I 0.827
GLIS2 Callithrix jacchus ENSCJAG00000019770 I 0.811
GLIS2 Canis familiaris ENSCAFG00000019227 I 0.811
GLIS2 Bos taurus ENSBTAG00000009199 I 0.811
ENSAMXG00000011871 Astyanax mexicanus ENSAMXG00000011871 I 0.772
GLIS2 Equus caballus ENSECAG00000020639 I 0.811
GLIS2 Erinaceus europaeus ENSEEUG00000007346 I 0.808
GLIS2 Echinops telfairi ENSETEG00000006418 I 0.811
ENSMPUG00000015020 Mustela putorius furo ENSMPUG00000015020 I 0.811
GLIS2 Monodelphis domestica ENSMODG00000016375 I 0.827
GLIS2 Myotis lucifugus ENSMLUG00000008930 I 0.811
GLIS2 Microcebus murinus ENSMICG00000017817 I 0.811
GLIS2 Loxodonta africana ENSLAFG00000018480 I 0.811
ENSLACG00000004164 Latimeria chalumnae ENSLACG00000004164 I 0.827
GLIS2 Gorilla gorilla ENSGGOG00000004717 I 0.811
GLIS2 Felis catus ENSFCAG00000011229 I 0.811
ENSAMEG00000002010 Ailuropoda melanoleuca ENSAMEG00000002010 I 0.811