CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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sp2
(
Takifugu rubripes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTRUG00000007642
T112319_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SP2
M04525_2.00
Homo sapiens
NYWAGYCCCGCCCMCYH
DRGKGGGCGGGRCTWRN
SELEX
Yin et al.(2017)
SP2_eDBD_HT-SELEX
0.800
0.928
SP2
M08326_2.00
Homo sapiens
YCCCGCCCM
KGGGCGGGR
ChIP-seq
Schmitges et al.(2016)
Q02086_1-3.RCADE
0.800
0.928
SP2
M08092_2.00
Homo sapiens
BYCCCGCCYCYBNNB
VNNVRGRGGCGGGRV
ChIP-seq
Mathelier et al.(2014)
MA0516.1
0.800
0.928
SP2
M07932_2.00
Homo sapiens
KSCTAGAGMGGCBVB
VBVGCCKCTCTAGSM
ChIP-seq
Gerstein et al.(2012)
K562_SP2_HudsonAlpha
0.800
0.928
SP2
M08911_2.00
Homo sapiens
SBBSNVSBCCCGCCYCYBBBBS
SVVVVRGRGGCGGGVSBNSVVS
Misc
Kulakovskiy et al.(2013)
SP2_HUMAN.H11MO.0.A
0.800
0.928
Sp2
M08970_2.00
Mus musculus
SBBSNVSBCCCGCCYCYBBBBS
SVVVVRGRGGCGGGVSBNSVVS
Misc
Kulakovskiy et al.(2013)
SP2_MOUSE.H11MO.0.B
0.800
0.928
SP2
M10250_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_01
0.800
0.928
SP2
M10251_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_04
0.800
0.928
SP2
M10252_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_06
0.800
0.928
SP2
M10253_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_Q3_01
0.800
0.928
SP2
M10254_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_Q3
0.800
0.928
SP2
M04526_2.00
Homo sapiens
NTWAGYCCCGCCCMCTT
AAGKGGGCGGGRCTWAN
SELEX
Yin et al.(2017)
SP2_eDBD_Methyl-HT-SELEX
0.800
0.928
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000018946
C2H2 ZF
519
543
HICHVPGCEKTFRKTSLLRAHVRLH
ENSTRUP00000018946
C2H2 ZF
549
573
FVCSWVFCGKRFTRSDELQRHARTH
ENSTRUP00000018946
C2H2 ZF
579
601
FECSQCQKRFMRSDHLTKHYKTH
ENSTRUP00000018947
C2H2 ZF
501
525
HICHVPGCEKTFRKTSLLRAHVRLH
ENSTRUP00000018947
C2H2 ZF
531
555
FVCSWVFCGKRFTRSDELQRHARTH
ENSTRUP00000018947
C2H2 ZF
561
583
FECSQCQKRFMRSDHLTKHYKTH
ENSTRUP00000018948
C2H2 ZF
492
516
HICHVPGCEKTFRKTSLLRAHVRLH
ENSTRUP00000018948
C2H2 ZF
522
546
FVCSWVFCGKRFTRSDELQRHARTH
ENSTRUP00000018948
C2H2 ZF
558
580
FECSQCQKRFMRSDHLTKHYKTH
ENSTRUP00000018949
C2H2 ZF
478
502
HICHVPGCEKTFRKTSLLRAHVRLH
ENSTRUP00000018949
C2H2 ZF
508
532
FVCSWVFCGKRFTRSDELQRHARTH
ENSTRUP00000018949
C2H2 ZF
538
560
FECSQCQKRFMRSDHLTKHYKTH
Links
Other
C2H2 ZF
family TFs
Other
Takifugu rubripes
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy