CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF354A
(
Tursiops truncatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTTRG00000010631
T113207_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.825
0.990
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.825
0.990
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.825
0.990
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.778
0.926
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000010076
C2H2 ZF
204
226
YKCSMCEKTFINTSSLRKHEKNH
ENSTTRP00000010076
C2H2 ZF
232
254
FKCKDCSKAFNQSSALIQHQITH
ENSTTRP00000010076
C2H2 ZF
260
282
YICKECGKAFTLSTSLYKHLRTH
ENSTTRP00000010076
C2H2 ZF
288
310
YRCKECGKSFSRRSGLFIHQKIH
ENSTTRP00000010076
C2H2 ZF
344
366
YLCNECGNTFKSSSSLRYHQRIH
ENSTTRP00000010076
C2H2 ZF
372
394
FKCSECGRAFSQSASLIQHERIH
ENSTTRP00000010076
C2H2 ZF
400
422
YRCNECGKGFTSISRLNRHRIIH
ENSTTRP00000010076
C2H2 ZF
428
450
YNCNECGKALSSHSTLIIHERIH
ENSTTRP00000010076
C2H2 ZF
456
478
CKCKVCGKAFRQSSALIQHQRMH
ENSTTRP00000010076
C2H2 ZF
484
506
YKCNECGKTFRCNSSLSNHQRIH
ENSTTRP00000010076
C2H2 ZF
512
534
YRCEECGISFGQSSALIQHRRIH
ENSTTRP00000010076
C2H2 ZF
540
562
FKCNTCGKTFRQSSSRIAHQRIH
ENSTTRP00000010076
C2H2 ZF
568
590
YECNTCGKLFNHRSSLTNHYKIH
Links
Other
C2H2 ZF
family TFs
Other
Tursiops truncatus
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy