CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF250
(
Tursiops truncatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTTRG00000013860
T113314_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY
RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.774
0.883
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB
VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.774
0.883
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.774
0.883
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.774
0.883
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN
NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.774
0.883
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000013143
C2H2 ZF
200
222
YRCVECGKCFGRSSHLLQHQRTH
ENSTTRP00000013143
C2H2 ZF
228
250
YVCGVCGKAFSQSSVLSKHRRIH
ENSTTRP00000013143
C2H2 ZF
256
278
YACHECGKAFRVSSDLAQHHKIH
ENSTTRP00000013143
C2H2 ZF
284
306
HECLECRKAFTQLSHLLQHQRIH
ENSTTRP00000013143
C2H2 ZF
312
334
YVCGVCGKAFNHSTVLRSHRRVH
ENSTTRP00000013143
C2H2 ZF
340
362
HACAECGRAFSVKRTLLQHQRVH
ENSTTRP00000013143
C2H2 ZF
368
390
YACGECGRAFSDRSVLIQHHSVH
ENSTTRP00000013143
C2H2 ZF
396
418
YECSECGKAFRHRSTLLNHERIH
ENSTTRP00000013143
C2H2 ZF
424
446
YGCYACGKAFVQHSHLTQHQRVH
ENSTTRP00000013143
C2H2 ZF
452
474
YVCSECGHAFSARRSLVQHQRVH
ENSTTRP00000013143
C2H2 ZF
480
502
FRCAQCDKAFSLKATLIVHLRTH
ENSTTRP00000013143
C2H2 ZF
508
530
YECSRCGKAFSQYSVLVQHQRIH
ENSTTRP00000013143
C2H2 ZF
536
558
YECGECGRAFNQHGHLIQHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Tursiops truncatus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy