gl (Drosophila melanogaster)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0004618 T114416_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA binding activity and DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in several processes, including circadian temperature homeostasis; entrainment of circadian clock by photoperiod; and ring gland development. Located in nucleus. Is expressed in several structures, including anterior ectoderm derivative; brain; corpus cardiacum; eye-antennal disc; and photoreceptor. Orthologous to human ZNF500 (zinc finger protein 500). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gl
M03671_2.00		 Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY		 SELEX
Nitta et al.(2015)
gl_1		 (Direct) (Direct)
gl
M06078_2.00		 Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH		 B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618		 (Direct) (Direct)
gl
M06079_2.00		 Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA		 B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618		 (Direct) (Direct)
gl
M06080_2.00		 Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN		 B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0083005 C2H2 ZF 438 459
FBpp0083005 C2H2 ZF 465 487
FBpp0083005 C2H2 ZF 493 515
FBpp0083005 C2H2 ZF 521 543
FBpp0083005 C2H2 ZF 549 571
FBpp0083006 C2H2 ZF 438 459
FBpp0083006 C2H2 ZF 465 487
FBpp0083006 C2H2 ZF 493 515
FBpp0083006 C2H2 ZF 521 543
FBpp0303075 C2H2 ZF 438 459
FBpp0303075 C2H2 ZF 465 487
FBpp0303075 C2H2 ZF 493 515
FBpp0303075 C2H2 ZF 521 543
FBpp0303075 C2H2 ZF 549 571

Links

Other C2H2 ZF family TFs
Other Drosophila melanogaster TFs

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50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action