CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Aef1
(
Drosophila melanogaster
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0005694
T114425_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Aef1
M03678_2.00
Drosophila melanogaster
VNWACAACAACDHN
NDHGTTGTTGTWNB
SELEX
Nitta et al.(2015)
Aef1_1
(Direct)
(Direct)
Aef1
M06107_2.00
Drosophila melanogaster
CAACWACW
WGTWGTTG
B1H
Zhu et al.(2011)
Aef1_FlyReg_FBgn0005694
(Direct)
(Direct)
Aef1
M06108_2.00
Drosophila melanogaster
RCAACAACAAC
GTTGTTGTTGY
B1H
Zhu et al.(2011)
Aef1_SANGER_5_FBgn0005694
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0078004
C2H2 ZF
184
206
FHCTVCDRRFRQLSTLTNHVKIH
FBpp0078004
C2H2 ZF
212
234
YKCNVCDKTFRQSSTLTNHLKIH
FBpp0078004
C2H2 ZF
240
262
YNCNFCPKHFRQLSTLANHVKIH
FBpp0078004
C2H2 ZF
268
290
FECVICKKQFRQSSTLNNHIKIH
FBpp0078005
C2H2 ZF
184
206
FHCTVCDRRFRQLSTLTNHVKIH
FBpp0078005
C2H2 ZF
212
234
YKCNVCDKTFRQSSTLTNHLKIH
FBpp0078005
C2H2 ZF
240
262
YNCNFCPKHFRQLSTLANHVKIH
FBpp0078005
C2H2 ZF
268
290
FECVICKKQFRQSSTLNNHIKIH
FBpp0078006
C2H2 ZF
184
206
FHCTVCDRRFRQLSTLTNHVKIH
FBpp0078006
C2H2 ZF
212
234
YKCNVCDKTFRQSSTLTNHLKIH
FBpp0078006
C2H2 ZF
240
262
YNCNFCPKHFRQLSTLANHVKIH
FBpp0078006
C2H2 ZF
268
290
FECVICKKQFRQSSTLNNHIKIH
FBpp0303189
C2H2 ZF
184
206
FHCTVCDRRFRQLSTLTNHVKIH
FBpp0303189
C2H2 ZF
212
234
YKCNVCDKTFRQSSTLTNHLKIH
FBpp0303189
C2H2 ZF
240
262
YNCNFCPKHFRQLSTLANHVKIH
FBpp0303189
C2H2 ZF
268
290
FECVICKKQFRQSSTLNNHIKIH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila melanogaster
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy