CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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sqz
(
Drosophila melanogaster
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0010768
T114427_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in dendrite guidance and neuroblast development. Is expressed in several structures, including Leucokinin neurons; embryonic/larval central nervous system; embryonic/larval digestive system; epithelium; and extended germ band embryo. Orthologous to human ZNF384 (zinc finger protein 384). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sqz
M06109_2.00
Drosophila melanogaster
KTTTTTTTBDTDNDBB
VVHNHAHVAAAAAAAM
B1H
Zhu et al.(2011)
sqz_SANGER_5_FBgn0010768
(Direct)
(Direct)
sqz
M06110_2.00
Drosophila melanogaster
NNNKTTTTTTDBNBN
NVNVHAAAAAAMNNN
B1H
Zhu et al.(2011)
sqz_SOLEXA_5_FBgn0010768
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0083147
C2H2 ZF
158
180
YKCGSCSKSFANSSYLSQHTRIH
FBpp0083147
C2H2 ZF
186
208
YRCEICQRKFTQLSHLQQHIRTH
FBpp0083147
C2H2 ZF
214
238
YKCRHAGCPKAFSQLSNLQSHSRCH
FBpp0083147
C2H2 ZF
244
266
FKCNSCYKCFSDEMTLLEHIPKH
FBpp0083147
C2H2 ZF
275
297
HICNLCGKSYTQETYLQKHLQKH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila melanogaster
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy