CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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seq
(
Drosophila melanogaster
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0028991
T114461_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable myosin II head/neck binding activity. Involved in negative regulation of transcription by RNA polymerase II; neuron development; and open tracheal system development. Located in nucleus. Is expressed in several structures, including ectoderm; ectoderm anlage; epidermis; extended germ band embryo; and nervous system. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
seq
M03684_2.00
Drosophila melanogaster
NDAMCCACCCYTAW
WTARGGGTGGKTHN
SELEX
Nitta et al.(2015)
seq_1
(Direct)
(Direct)
seq
M03685_2.00
Drosophila melanogaster
NNWWCAWCCCYTAW
WTARGGGWTGWWNN
SELEX
Nitta et al.(2015)
seq_2
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0099939
C2H2 ZF
403
430
YCLVCAKNDIFKTFKNKYSFQRHAYLFH
FBpp0099939
C2H2 ZF
438
461
FACPICNKEFSRPDKMKMHKKDKH
FBpp0310607
C2H2 ZF
403
430
YCLVCAKNDIFKTFKNKYSFQRHAYLFH
FBpp0310607
C2H2 ZF
438
461
FACPICNKEFSRPDKMKMHKKDKH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila melanogaster
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy