CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA19053
(
Drosophila pseudoobscura
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0079051
T114743_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Aef1
M03678_2.00
Drosophila melanogaster
VNWACAACAACDHN
NDHGTTGTTGTWNB
SELEX
Nitta et al.(2015)
Aef1_1
0.824
0.978
Aef1
M06107_2.00
Drosophila melanogaster
CAACWACW
WGTWGTTG
B1H
Zhu et al.(2011)
Aef1_FlyReg_FBgn0005694
0.824
0.978
Aef1
M06108_2.00
Drosophila melanogaster
RCAACAACAAC
GTTGTTGTTGY
B1H
Zhu et al.(2011)
Aef1_SANGER_5_FBgn0005694
0.824
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0275567
C2H2 ZF
197
219
FHCTVCDRRFRQLSTLTNHVKIH
FBpp0275567
C2H2 ZF
225
247
YKCNVCDKTFRQSSTLTNHLKIH
FBpp0275567
C2H2 ZF
253
275
YNCNYCPKHFRQLSTLANHIKIH
FBpp0275567
C2H2 ZF
281
303
FECVICKKQFRQSSTLNNHIKIH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila pseudoobscura
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy