CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GH10862
(
Drosophila grimshawi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0118343
T115262_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.816
0.978
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.816
0.978
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.816
0.978
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.794
0.891
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.794
0.891
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0144768
C2H2 ZF
390
412
FSCLECGKVFNAHYNLTRHMPVH
FBpp0144768
C2H2 ZF
418
440
FVCKVCGKGFRQASTLCRHKIIH
FBpp0144768
C2H2 ZF
446
468
HKCQTCGKAFNRSSTLNTHARIH
FBpp0144768
C2H2 ZF
474
496
FVCEYCGKGFHQKGNYKNHKLTH
FBpp0144768
C2H2 ZF
502
524
YKCSICNKAFHQIYNLTFHMHTH
FBpp0144768
C2H2 ZF
530
553
YTCRVCAKGFCRNFDLKKHMRKLH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila grimshawi
TFs
172 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy