CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM11927
(
Drosophila sechellia
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0166868
T115997_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Kr
M03663_2.00
Drosophila melanogaster
BTTAACCCTTTH
DAAAGGGTTAAV
SELEX
Nitta et al.(2015)
Kr_1
0.827
1.000
Kr
M06047_2.00
Drosophila melanogaster
DTWACCCBTT
AAVGGGTWAH
B1H
Zhu et al.(2011)
Kr_FlyReg_FBgn0001325
0.827
1.000
Kr
M06048_2.00
Drosophila melanogaster
TAACCCBTTNV
BNAAVGGGTTA
B1H
Zhu et al.(2011)
Kr_NAR_FBgn0001325
0.827
1.000
Kr
M06049_2.00
Drosophila melanogaster
WACCCYTY
RARGGGTW
B1H
Zhu et al.(2011)
Kr_SANGER_5_FBgn0001325
0.827
1.000
Kr
M08411_2.00
Drosophila melanogaster
NNYAACCCTTTBNN
NNVAAAGGGTTRNN
ChIP-chip
Mathelier et al.(2014)
MA0452.2
0.827
1.000
Kr
M09661_2.00
Drosophila melanogaster
HWACCCKTTBN
NVAAMGGGTWD
Misc
Kulakovskiy et al.(2009)
Kr
0.827
1.000
Kr
M10371_2.00
Drosophila melanogaster
WWAACCCRKT
AMYGGGTTAW
Transfac
Matys et al.(2006)
I$KR_01
0.827
1.000
Kr
M10372_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$KR_Q6
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0193404
C2H2 ZF
218
240
FTCKICSRSFGYKHVLQNHERTH
FBpp0193404
C2H2 ZF
246
268
FECPECHKRFTRDHHLKTHMRLH
FBpp0193404
C2H2 ZF
274
296
YHCSHCDRQFVQVANLRRHLRVH
FBpp0193404
C2H2 ZF
302
324
YTCEICDGKFSDSNQLKSHMLVH
FBpp0193404
C2H2 ZF
330
351
FECERCHMKFRRRHHLMNHKCG
Links
Other
C2H2 ZF
family TFs
Other
Drosophila sechellia
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy