CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GK18133
(
Drosophila willistoni
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0220132
T116798_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
esg
M06050_2.00
Drosophila melanogaster
CACCTGH
DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.818
0.947
SNAI2
M00221_2.00
Homo sapiens
HACYTGH
DCARGTD
PBM
Barrera et al.(2016)
SNAI2_REF
0.769
0.814
SNAI2
M02873_2.00
Homo sapiens
VCACCTGYN
NRCAGGTGB
SELEX
Jolma et al.(2013)
SNAI2_1
0.769
0.814
SNAI2
M04392_2.00
Homo sapiens
YGCACCTGYY
RRCAGGTGCR
SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX
0.769
0.814
SNAI2
M04394_2.00
Homo sapiens
YRCACCTGYY
RRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX
0.769
0.814
SNAI2
M08853_2.00
Homo sapiens
NVCACCTGYY
RRCAGGTGBN
Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A
0.769
0.814
Snai2
M08973_2.00
Mus musculus
VNRCACCTGYY
RRCAGGTGYNB
Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A
0.769
0.814
SNAI2
M10102_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6_01
0.769
0.814
SNAI2
M10103_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6_02
0.769
0.814
SNAI2
M10104_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6
0.769
0.814
SNAI2
M00220_2.00
Homo sapiens
NHACCTGY
RCAGGTDN
PBM
Barrera et al.(2016)
SNAI2_D119E
0.769
0.814
SNAI2
M04393_2.00
Homo sapiens
YRCACCTGYN
NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX
0.769
0.814
SNAI2
M04395_2.00
Homo sapiens
YRCACCTGYN
NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX
0.769
0.814
wor
M03664_2.00
Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC
SELEX
Nitta et al.(2015)
wor_1
0.769
0.841
wor
M03665_2.00
Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH
SELEX
Nitta et al.(2015)
wor_2
0.769
0.841
wor
M06051_2.00
Drosophila melanogaster
CACCTGY
RCAGGTG
B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983
0.769
0.841
wor
M06052_2.00
Drosophila melanogaster
VCACCTGY
RCAGGTGB
B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983
0.769
0.841
SNAI2
M00222_2.00
Homo sapiens
HACYTGHNNN
NNNDCARGTD
PBM
Barrera et al.(2016)
SNAI2_T234I
0.765
0.805
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0247276
C2H2 ZF
342
364
YQCPDCQKSYSTFSGLTKHQQFH
FBpp0247276
C2H2 ZF
377
399
FSCKDCEKTYVSLGALKMHIRTH
FBpp0247276
C2H2 ZF
403
425
CKCQMCGKAFSRPWLLQGHIRTH
FBpp0247276
C2H2 ZF
431
453
FSCQHCHRAFADRSNLRAHLQTH
FBpp0247276
C2H2 ZF
459
479
YSCNNCAKTFSRMSLLTKHSE
Links
Other
C2H2 ZF
family TFs
Other
Drosophila willistoni
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy