CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA23469
(
Drosophila pseudoobscura
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0244871
T117140_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Blimp-1
M03692_2.00
Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN
SELEX
Nitta et al.(2015)
Blimp-1_1
0.827
1.000
Blimp-1
M06141_2.00
Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT
B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625
0.827
1.000
Blimp-1
M06142_2.00
Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY
B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0274302
C2H2 ZF
914
936
YECNVCCKTFGQLSNLKVHLRTH
FBpp0274302
C2H2 ZF
942
964
FKCNVCTKSFTQLAHLQKHHLVH
FBpp0274302
C2H2 ZF
970
992
HQCDICKKRFSSTSNLKTHLRLH
FBpp0274302
C2H2 ZF
998
1020
YACDLCPQKFTQFVHLKLHKRLH
FBpp0274302
C2H2 ZF
1026
1047
YVCQGCDKKYISASGLRTHWKT
Links
Other
C2H2 ZF
family TFs
Other
Drosophila pseudoobscura
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy