GA30442 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0264579 T117229_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lola
M06091_2.00 		Drosophila melanogaster
KRAACCY
RGGTTYM		 B1H
Zhu et al.(2011)
lola-PA_SANGER_5_FBgn0005630 		0.827 1.000
lola
M06092_2.00 		Drosophila melanogaster
GGAAAAHYC
GRDTTTTCC		 B1H
Zhu et al.(2011)
lola-PC_SANGER_5_FBgn0005630 		0.827 1.000
lola
M06093_2.00 		Drosophila melanogaster
CCCCCCAHW
WDTGGGGGG		 B1H
Zhu et al.(2011)
lola-PD_SANGER_5_FBgn0005630 		0.827 1.000
lola
M06094_2.00 		Drosophila melanogaster
MAACTCCAYY
RRWGGAGTTK		 B1H
Zhu et al.(2011)
lola-PF_SANGER_5_FBgn0005630 		0.827 1.000
lola
M06095_2.00 		Drosophila melanogaster
KGAGCTT
AAGCTCM		 B1H
Zhu et al.(2011)
lola-PG_SANGER_2.5_FBgn0005630 		0.827 1.000
lola
M06096_2.00 		Drosophila melanogaster
TTATGYT
ARCATAA		 B1H
Zhu et al.(2011)
lola-PJ_SANGER_5_FBgn0005630 		0.827 1.000
lola
M06097_2.00 		Drosophila melanogaster
BMNCCTACNHD
HDNGTAGGNKV		 B1H
Zhu et al.(2011)
lola_PK_SANGER_5_FBgn0005630 		0.827 1.000
lola
M06098_2.00 		Drosophila melanogaster
TGMNCCACM
KGTGGNKCA		 B1H
Zhu et al.(2011)
lola-PL_SANGER_2.5_FBgn0005630 		0.827 1.000
lola
M06099_2.00 		Drosophila melanogaster
TYTGGGCR
YGCCCARA		 B1H
Zhu et al.(2011)
lola-PO_SANGER_5_FBgn0005630 		0.827 1.000
lola
M06100_2.00 		Drosophila melanogaster
AVRAWCAMC
GKTGWTYBT		 B1H
Zhu et al.(2011)
lola-PQ_SANGER_5_FBgn0005630 		0.827 1.000
lola
M06101_2.00 		Drosophila melanogaster
GCTCAAHR
YDTTGAGC		 B1H
Zhu et al.(2011)
lola-PT_SANGER_5_FBgn0005630 		0.827 1.000
lola
M06102_2.00 		Drosophila melanogaster
SCTCAAHRM
KYDTTGAGS		 B1H
Zhu et al.(2011)
lola-PU_SANGER_5_FBgn0005630 		0.827 1.000
lola
M06103_2.00 		Drosophila melanogaster
STCTGCA
TGCAGAS		 B1H
Zhu et al.(2011)
lola-PW_SANGER_5_FBgn0005630 		0.827 1.000
lola
M06104_2.00 		Drosophila melanogaster
RACCYYVRC
GYBRRGGTY		 B1H
Zhu et al.(2011)
lola-PY_SANGER_2.5_FBgn0005630 		0.827 1.000
lola
M06105_2.00 		Drosophila melanogaster
RAGCTTT
AAAGCTY		 B1H
Zhu et al.(2011)
lola_SANGER_5_FBgn0005630 		0.827 1.000
lola
M06106_2.00 		Drosophila melanogaster
GAGCTTTBN
NVAAAGCTC		 B1H
Zhu et al.(2011)
lola_SOLEXA_5_FBgn0005630 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0307093 C2H2 ZF 788 809
FBpp0307093 C2H2 ZF 818 841
FBpp0307095 C2H2 ZF 692 713
FBpp0307095 C2H2 ZF 721 744
FBpp0307100 C2H2 ZF 679 700
FBpp0307100 C2H2 ZF 708 730
FBpp0307103 C2H2 ZF 677 698
FBpp0307104 C2H2 ZF 900 921
FBpp0307104 C2H2 ZF 930 953
FBpp0307106 C2H2 ZF 498 521
FBpp0307106 C2H2 ZF 529 550
FBpp0307107 C2H2 ZF 461 482
FBpp0307107 C2H2 ZF 493 515
FBpp0307109 C2H2 ZF 479 500
FBpp0307109 C2H2 ZF 509 532
FBpp0307111 C2H2 ZF 528 549
FBpp0307111 C2H2 ZF 557 580
FBpp0307112 C2H2 ZF 536 556
FBpp0307112 C2H2 ZF 565 589
FBpp0307113 C2H2 ZF 550 571
FBpp0307113 C2H2 ZF 579 602
FBpp0307115 C2H2 ZF 479 500
FBpp0307115 C2H2 ZF 509 532
FBpp0307116 C2H2 ZF 498 521
FBpp0307116 C2H2 ZF 529 550

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

Invalid Input OrderBy

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action