CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ELF6
(
Arabidopsis lyrata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
fgenesh2_kg.6__338__AT5G04240.1
T117370_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.6__338__AT5G04240.1
C2H2 ZF
1225
1247
RCYLEGCKMTFESKAKLQAHKRN
fgenesh2_kg.6__338__AT5G04240.1
C2H2 ZF
1248
1271
RCTYEGCGKKFRAHKYLVLHQRVH
fgenesh2_kg.6__338__AT5G04240.1
C2H2 ZF
1307
1333
YKCKVDGCGLSFRFVSDYSRHRRKTLH
Links
Other
C2H2 ZF
family TFs
Other
Arabidopsis lyrata
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.9217s0004
Capsella grandiflora
Cagra.9217s0004
N
0.781
ELF6
Arabidopsis thaliana
AT5G04240
N
0.765
Carubv10000051m.g
Capsella rubella
Carubv10000051m.g
N
0.765
Bostr.2128s0023
Boechera stricta
Bostr.2128s0023
N
0.762