CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GALMADRAFT_256609
(
Galerina marginata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GALMADRAFT_256609
T117837_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_256250
M01463_2.00
Schizophyllum commune
BGCGRATC
GATYCGCV
PBM
Najafabadi et al.(2015a)
pTH10245
0.763
0.778
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDR68766
C2H2 ZF
223
245
HACTMCHKRFDRPSTLRKHLLVH
KDR68766
C2H2 ZF
251
272
FVCDTCGRRFGVASNLNRHVKR
Links
Other
C2H2 ZF
family TFs
Other
Galerina marginata
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy