CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GGTG_01441
(
Gaeumannomyces graminis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GGTG_01441
T118091_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02666
M01875_2.00
Neurospora crassa
NNNMGCCACN
NGTGGCKNNN
PBM
Weirauch et al.(2014)
pTH8838
0.804
0.912
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GGTG_01441T0
C2H2 ZF
277
299
HKCPCCDTVFTRHHNLKSHLLTH
GGTG_01441T0
C2H2 ZF
305
327
YACDTCQMRFRRLHDLKRHSKLH
GGTG_01441T0
C2H2 ZF
333
354
HICPKCDRKFARGDALARHAKG
GGTG_01441T1
C2H2 ZF
277
299
HKCPCCDTVFTRHHNLKSHLLTH
GGTG_01441T1
C2H2 ZF
305
327
YACDTCQMRFRRLHDLKRHSKLH
GGTG_01441T1
C2H2 ZF
333
354
HICPKCDRKFARGDALARHAKG
Links
Other
C2H2 ZF
family TFs
Other
Gaeumannomyces graminis
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy