CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GGTG_04373
(
Gaeumannomyces graminis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GGTG_04373
T118097_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03421
M01194_2.00
Neurospora crassa
GTCCGTGCRN
NYGCACGGAC
PBM
Lambert et al.(2019)
pTH11830
0.757
0.750
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GGTG_04373T0
C2H2 ZF
16
40
FQCDWQSCNKSFNRKSDLQRHYRIH
GGTG_04373T0
C2H2 ZF
46
70
YSCNTPGCGKSFIQRSALTVHIRTH
GGTG_04373T0
C2H2 ZF
76
100
HQCQHIGCGKRFSDSSSLARHRRIH
GGTG_04373T0
C2H2 ZF
106
131
YKCAHDGCLKSFCRKTTMVKHQRRSH
Links
Other
C2H2 ZF
family TFs
Other
Gaeumannomyces graminis
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy