CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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JAAARDRAFT_97104
(
Jaapia argillacea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
JAAARDRAFT_97104
T120221_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_110420
M01458_2.00
Schizophyllum commune
VCGCCACNNN
NNNGTGGCGB
PBM
Najafabadi et al.(2015a)
pTH10238
0.768
0.857
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDQ53465
C2H2 ZF
12
34
FSCDMCALSFNRQHDLKRHRDTH
KDQ53465
C2H2 ZF
40
59
YLCNGGCGKTFTRKDALKRH
Links
Other
C2H2 ZF
family TFs
Other
Jaapia argillacea
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy